RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 RTN4RQ9BZR6 473 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 LYPD3O95274 346 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 CEACAM1P13688 526 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 IGHV1-2P23083 117 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 PAFAH1B2P68402 229 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 C1QTNF5Q9BXJ0 243 aa14.67□□□□□ -0.06
CDCP1-201ENST00000296129 B9A039 149 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 ZNF735P0CB33 412 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 MDKP21741 143 aaPredicted RBP14.66□□□□□ -0.06
CDCP1-201ENST00000296129 RBM14Q96PK6 669 aaKnown RBP14.66□□□□□ -0.06
CDCP1-201ENST00000296129 QTRT1Q9BXR0 403 aaKnown RBP14.66□□□□□ -0.06
CDCP1-201ENST00000296129 ANK1P16157 1881 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 SIP14410 1827 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 C9orf172C9J069 976 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 EIF3GO75821 320 aaKnown RBP eCLIP14.66□□□□□ -0.06
CDCP1-201ENST00000296129 MELTFP08582 738 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 G0S2P27469 103 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 RPL29P47914 159 aaKnown RBP14.66□□□□□ -0.06
CDCP1-201ENST00000296129 WDYHV1Q96HA8 205 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 PF4V1P10720 104 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 RPL39P5Q59GN2 51 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 MAP1LC3CQ9BXW4 147 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 NUBP1P53384 320 aa14.66□□□□□ -0.06
CDCP1-201ENST00000296129 ID4P47928 161 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 ABHD17AQ96GS6 310 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 RARRES2Q99969 163 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 MESP1Q9BRJ9 268 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 SEC16AO15027 2179 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 LOC102723996A0A087X1L8 192 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 GLRXP35754 106 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 SELENOTP62341 195 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 PNKDQ8N490 385 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 SGMS2Q8NHU3 365 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 ZCCHC14Q8WYQ9 949 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 PTBP3O95758 552 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 HSPB1P04792 205 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 SCGB1C2P0DMR2 95 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 LRRC75BQ2VPJ9 315 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 EIF4E3Q8N5X7 224 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 CLEC7AQ9BXN2 247 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 CHODLQ9H9P2 273 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 RALYQ9UKM9 306 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 CELA3BP08861 270 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 CD40P25942 277 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 HOXA4Q00056 320 aaPredicted RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 TMEM186Q96B77 213 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 RP1L1Q8IWN7 2480 aaPredicted RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 LHX2P50458 406 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 MEF2BQ02080 365 aaPredicted RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 NRN1LQ496H8 165 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 TCF19Q9Y242 345 aa14.65□□□□□ -0.06
CDCP1-201ENST00000296129 MRPS18CQ9Y3D5 142 aaKnown RBP14.65□□□□□ -0.06
CDCP1-201ENST00000296129 APOBEC3AP31941 199 aaPredicted RBP14.64□□□□□ -0.07
CDCP1-201ENST00000296129 TFPI2P48307 235 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 CLDN18P56856 261 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 SLC35B1P78383 322 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 OR4C13Q8NGP0 309 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 IGHV2OR16-5A0A0B4J2B6 119 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 H0YL77 283 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 SMIM8Q96KF7 97 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 TMEM191AQ9H0A3 160 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 FAM201AQ5SY85 155 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 METTL26Q96S19 204 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 CFHR1Q03591 330 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 WDFY1Q8IWB7 410 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 FAM57AQ8TBR7 257 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 MRPL37Q9BZE1 423 aaKnown RBP14.64□□□□□ -0.07
CDCP1-201ENST00000296129 ERVH48-1M5A8F1 160 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 ABLIM2Q6H8Q1 611 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 PCSK4Q6UW60 755 aa14.64□□□□□ -0.07
CDCP1-201ENST00000296129 LIPFP07098 398 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 ARL14EPLP0DKL9 152 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 IFITM2Q01629 132 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 DGAT2L7PQ6IED9 249 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 C9orf106Q8NAJ2 232 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 C16orf92Q96LL3 132 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 CCL19Q99731 98 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 ARID1AO14497 2285 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 DICER1Q9UPY3 1922 aaKnown RBP14.63□□□□□ -0.07
CDCP1-201ENST00000296129 RNF224P0DH78 156 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 ATP5J2P56134 94 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 SPANXN1Q5VSR9 72 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 C1orf162Q8NEQ5 155 aaPredicted RBP14.63□□□□□ -0.07
CDCP1-201ENST00000296129 A0A1B0GTI1 187 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 LY6EQ16553 131 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 BSPH1Q075Z2 132 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 TWIST1Q15672 202 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 ZSWIM8A7E2V4 1837 aa14.63□□□□□ -0.07
CDCP1-201ENST00000296129 PGPA6NDG6 321 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 C12orf77C9JDV5 145 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 IGFBP3P17936 291 aaPredicted RBP14.62□□□□□ -0.07
CDCP1-201ENST00000296129 FCGR2BP31994 310 aaPredicted RBP14.62□□□□□ -0.07
CDCP1-201ENST00000296129 ZFP36L1Q07352 338 aaKnown RBP14.62□□□□□ -0.07
CDCP1-201ENST00000296129 Q6ZN92 141 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 DEPPQ9NTK1 212 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 TMEM106BQ9NUM4 274 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 TMEM189A5PLL7 270 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 ZP1P60852 638 aa14.62□□□□□ -0.07
CDCP1-201ENST00000296129 A0A087WV48 116 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms