RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 WDFY1Q8IWB7 410 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM252Q8N6L7 170 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 AQP3Q92482 292 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 SVILO95425 2214 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 SELENOTP62341 195 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 BSPH1Q075Z2 132 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 H1FOOQ8IZA3 346 aaPredicted RBP14.78□□□□□ -0.04
SHANK1-201ENST00000293441 OR1N2Q8NGR9 330 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 SERF2P84101 59 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 EEF1AKMT3Q96AZ1 226 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 NDUFB4O95168 129 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 PEAR1Q5VY43 1037 aaPredicted RBP14.77□□□□□ -0.04
SHANK1-201ENST00000293441 FADS6Q8N9I5 356 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 BET1LQ9NYM9 111 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 ANKRD36A6QL64 1941 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM186Q96B77 213 aa14.77□□□□□ -0.04
SHANK1-201ENST00000293441 SSBP3Q9BWW4 388 aaPredicted RBP14.77□□□□□ -0.04
SHANK1-201ENST00000293441 XIRP1Q702N8 1843 aaKnown RBP14.77□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV3-35A0A0C4DH35 117 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 MARCH11A6NNE9 402 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 IGKV3-20P01619 116 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV3-23P01764 117 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 MFAP2P55001 183 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 APCDD1LQ8NCL9 501 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 OR5P3Q8WZ94 311 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 TBX15Q96SF7 602 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 ZG16O60844 167 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 RAMP1O60894 148 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 EGR4Q05215 589 aa14.77□□□□□ -0.05
SHANK1-201ENST00000293441 TRAV30A0A087WSZ9 112 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 TRBV5-7A0A0A0MS05 114 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 FAM74A7A6NL05 159 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 MEGF10Q96KG7 1140 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 MPDU1O75352 247 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 TMEM106BQ9NUM4 274 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 RELBQ01201 579 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF345Q14585 488 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 GPR132Q9UNW8 380 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 SEC16AO15027 2179 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 HSPE1P61604 102 aaKnown RBP14.76□□□□□ -0.05
SHANK1-201ENST00000293441 ELOA3CA0A087WX78 387 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF324O75467 553 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-201ENST00000293441 BCL2P10415 239 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 FAM57AQ8TBR7 257 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 Q96M66 194 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 MIEN1Q9BRT3 115 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 LINC00470Q9BZP3 86 aa14.76□□□□□ -0.05
SHANK1-201ENST00000293441 NPIPB11E5RHQ5 1161 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 H3BTX0 84 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 CECR9P0C854 216 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 CX3CL1P78423 397 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF502Q8TBZ5 544 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 PHLDA3Q9Y5J5 127 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 H3BVH4 76 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 P2RY4P51582 365 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 C1orf100Q5SVJ3 147 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 DNM1P46Q6ZS02 220 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 PSG9Q00887 426 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 CYB561D1Q8N8Q1 229 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 LSM10Q969L4 123 aaKnown RBP14.75□□□□□ -0.05
SHANK1-201ENST00000293441 DPH3Q96FX2 82 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 A8MWL6 223 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 RELQ04864 619 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-201ENST00000293441 FAM209AQ5JX71 171 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 IBA57Q5T440 356 aaKnown RBP14.75□□□□□ -0.05
SHANK1-201ENST00000293441 FAM201AQ5SY85 155 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 ARID1AO14497 2285 aa14.75□□□□□ -0.05
SHANK1-201ENST00000293441 TRAV20A0A0B4J274 112 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 GCSHP23434 173 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 GLRXP35754 106 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 TNFRSF9Q07011 255 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 C10orf128Q5T292 105 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF818PQ6ZRF7 136 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 FAM168AQ92567 244 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 PACRGQ96M98 296 aaPredicted RBP14.74□□□□□ -0.05
SHANK1-201ENST00000293441 ALX4Q9H161 411 aaPredicted RBP14.74□□□□□ -0.05
SHANK1-201ENST00000293441 NPIPB6E9PJ23 425 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 CIDEAO60543 219 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 SGMS2Q8NHU3 365 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 TMEM45BQ96B21 275 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 PGLYRP4Q96LB8 373 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 RP1P56715 2156 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 KLF4O43474 513 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 HERPUD1Q15011 391 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 TAF15Q92804 592 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHANK1-201ENST00000293441 PPP1R3EQ9H7J1 279 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 DNAJC4Q9NNZ3 241 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 PTPRFP10586 1907 aa14.74□□□□□ -0.05
SHANK1-201ENST00000293441 GPX1P07203 203 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 NPPCP23582 126 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 ZXDCQ2QGD7 858 aaPredicted RBP14.73□□□□□ -0.05
SHANK1-201ENST00000293441 RPL39P5Q59GN2 51 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 MDKP21741 143 aaPredicted RBP14.73□□□□□ -0.05
SHANK1-201ENST00000293441 CKS2P33552 79 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 SLC16A13Q7RTY0 426 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 TRGV3P03979 118 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 VWCEQ96DN2 955 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 EIF3GO75821 320 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHANK1-201ENST00000293441 PQLC2Q6ZP29 291 aa14.73□□□□□ -0.05
SHANK1-201ENST00000293441 M0R143 59 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms