RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ANKRD37Q7Z713 158 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 SAXO1Q8IYX7 474 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 OR5A2Q8NGI9 324 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 C12orf49Q9H741 205 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 ELOVL5Q9NYP7 299 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 FREM1Q5H8C1 2179 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 RBFOX2O43251 390 aaKnown RBP eCLIP13.82□□□□□ -0.2
GPC1-201ENST00000264039 ACSF3Q4G176 576 aaPredicted RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 ABHD14BQ96IU4 210 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 CFAP54Q96N23 3096 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 PRR14LQ5THK1 2151 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 HELTA6NFD8 242 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 BMPR1BO00238 502 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 CRYBB3P26998 211 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 CD1BP29016 333 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 SSX8Q7RTT4 187 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 RAB37Q96AX2 223 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 C20orf144Q9BQM9 153 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 LINC00205P59089 165 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 MRGPRDQ8TDS7 321 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 ABHD3Q8WU67 409 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 ZC2HC1AQ96GY0 325 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 SPTBN2O15020 2390 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 A0A0J9YW62 118 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 A0A1W2PRS3 328 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 HYPMO75409 117 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 VENTXO95231 258 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 APCSP02743 223 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 CEBPDP49716 269 aaPredicted RBP13.81□□□□□ -0.2
GPC1-201ENST00000264039 ZNF137PP52743 207 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 WIPI1Q5MNZ9 446 aaPredicted RBP13.81□□□□□ -0.2
GPC1-201ENST00000264039 WDR74Q6RFH5 385 aaPredicted RBP13.81□□□□□ -0.2
GPC1-201ENST00000264039 VKORC1L1Q8N0U8 176 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 VWCEQ96DN2 955 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 OR8B2Q96RD0 313 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 CACNA1HO95180 2353 aa13.81□□□□□ -0.2
GPC1-201ENST00000264039 PRR19A6NJB7 356 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 IFI6P09912 130 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 CCL1P22362 96 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 AMMECR1LQ6DCA0 310 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 RTL10Q7L3V2 364 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 PMCHL1Q16048 86 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 TPTE2P1Q5T6R2 138 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 C1orf174Q8IYL3 243 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 NUDT11Q96G61 164 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 CRIM1Q9NZV1 1036 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 RAMP3O60896 148 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 S1PR2O95136 353 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 NGFP01138 241 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 C3orf79P0CE67 100 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 MPV17L2Q567V2 206 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 FAM216AQ8WUB2 273 aa13.8□□□□□ -0.2
GPC1-201ENST00000264039 HSD17B10Q99714 261 aaKnown RBP13.8□□□□□ -0.2
GPC1-201ENST00000264039 PI4KAP42356 2102 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 CCL3P10147 92 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 FAM27BQ5VT28 67 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 OR1L1Q8NH94 360 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 IGHV4-34P06331 123 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 SPTBN1Q01082 2364 aaKnown RBP13.79□□□□□ -0.2
GPC1-201ENST00000264039 OR2H1Q9GZK4 316 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 MEGF9Q9H1U4 602 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 A0A1W2PPC4 97 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 PIAS2O75928 621 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 COA6Q5JTJ3 125 aaKnown RBP13.79□□□□□ -0.2
GPC1-201ENST00000264039 ABHD12Q8N2K0 398 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 GALMQ96C23 342 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 RNF115Q9Y4L5 304 aa13.79□□□□□ -0.2
GPC1-201ENST00000264039 NKX6-3A6NJ46 265 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 IGKV1-5P01602 117 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 NIT1Q86X76 327 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 OR52L2PQ8NGH6 319 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 CDIPTO14735 213 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 HAPLN4Q86UW8 402 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 OR5P3Q8WZ94 311 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 C10orf35Q96D05 121 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
GPC1-201ENST00000264039 ZNF703Q9H7S9 590 aaPredicted RBP13.78□□□□□ -0.2
GPC1-201ENST00000264039 CLEC5AQ9NY25 188 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 CACNA1BQ00975 2339 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 PKDREJQ9NTG1 2253 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 GAGE10A6NGK3 116 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 GJE1A6NN92 205 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 CRYABP02511 175 aaKnown RBP13.78□□□□□ -0.2
GPC1-201ENST00000264039 TDGF1P13385 188 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 FGFBP3Q8TAT2 258 aa13.78□□□□□ -0.2
GPC1-201ENST00000264039 IGFBP4P22692 258 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 TSPOP30536 169 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 GFRA1P56159 465 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 RHBDD2Q6NTF9 364 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 STPG3Q8N7X2 389 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 TMEM38BQ9NVV0 291 aa13.77□□□□□ -0.2
GPC1-201ENST00000264039 IGKV3D-11A0A0A0MRZ8 115 aa13.77□□□□□ -0.21
GPC1-201ENST00000264039 TIMP3P35625 211 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms