RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 FAM27BQ5VT28 67 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 OR4B1Q8NGF8 309 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 MRGPRDQ8TDS7 321 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 QTRT1Q9BXR0 403 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 WNT5BQ9H1J7 359 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 HIPK2Q9H2X6 1198 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 GNB4Q9HAV0 340 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 GNG12Q9UBI6 72 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 PSG11Q9UQ72 335 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 M0R2Z0 102 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 DNLZQ5SXM8 178 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 OR5A2Q8NGI9 324 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 NANOS1Q8WY41 292 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 MMP17Q9ULZ9 603 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 KIAA1549Q9HCM3 1950 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 GPR6P46095 362 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 SAXO1Q8IYX7 474 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 OR52L2PQ8NGH6 319 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 NAA38Q9BRA0 125 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 PSMG3Q9BT73 122 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 TMEM38BQ9NVV0 291 aa13.48□□□□□ -0.25
PRPF40B-201ENST00000261897 TRAV1-1A0A0B4J248 108 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 FCGR3BO75015 233 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 VAMP5O95183 116 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 MRPS21P82921 87 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 CATR1Q13166 79 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 TIGITQ495A1 244 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 CRIM1Q9NZV1 1036 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 CSN3P07498 182 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 GNG4P50150 75 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 TRAT1Q6PIZ9 186 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 PQLC2Q6ZP29 291 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 S100A7AQ86SG5 101 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 DRAM1Q8N682 238 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 PXMP4Q9Y6I8 212 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 CDIPTO14735 213 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 TOX4O94842 621 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 NPPCP23582 126 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 ENY2Q9NPA8 101 aa13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 MRPS18CQ9Y3D5 142 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-201ENST00000261897 NBASA2RRP1 2371 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 UQCRFS1P47985 274 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 FABP6P51161 128 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 OR8B8Q15620 311 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 PMCHL1Q16048 86 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 OBP2BQ9NPH6 170 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 ELOVL5Q9NYP7 299 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 KIR2DL5BA0A0G2JN68 375 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 KIR2DL5BA0A0G2JPC4 375 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 RPS19BP1Q86WX3 136 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 KIR2DL5AQ8N109 375 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 ABHD12Q8N2K0 398 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 OR2Y1Q8NGV0 311 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 DECR2Q9NUI1 292 aa13.46□□□□□ -0.25
PRPF40B-201ENST00000261897 MED13LQ71F56 2210 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 ODAMA1E959 279 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 PSG5Q15238 335 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 OR10D3Q8NH80 312 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 FAM216AQ8WUB2 273 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 NABP1Q96AH0 204 aa13.46□□□□□ -0.26
PRPF40B-201ENST00000261897 HSBP1L1C9JCN9 74 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 LMO7DNF2Z398 122 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 CLDN14O95500 239 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 CRYBB3P26998 211 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 SSR4P51571 173 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 FGF12P61328 243 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 LCN2P80188 198 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 C3AR1Q16581 482 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 RNF2Q99496 336 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 LNP1A1A4G5 178 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 CD1BP29016 333 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 FOXA3P55318 350 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 AESQ08117 197 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 TPTE2P1Q5T6R2 138 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 DLL3Q9NYJ7 618 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 hCG_38984A0A1B0GV85 526 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 SYNGR3O43761 229 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 PDE6DO43924 150 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 CFHR1Q03591 330 aa13.45□□□□□ -0.26
PRPF40B-201ENST00000261897 Q5PR19 223 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms