RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LRRC29Q8WV35 223 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
VHL-201ENST00000256474 MALSU1Q96EH3 234 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
VHL-201ENST00000256474 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
VHL-201ENST00000256474 LINC00473A8K010 186 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 NDUFB4O95168 129 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 GYPAP02724 150 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 CD33P20138 364 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 GPR12P47775 334 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 BATFQ16520 125 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
VHL-201ENST00000256474 A0A087X0M5 115 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 A0A1B0GX30 115 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 SELLP14151 372 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 ZNRF1Q8ND25 227 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 PINX1Q96BK5 328 aaKnown RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 LRRC30A6NM36 301 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 GZMHP20718 246 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 LMO1P25800 156 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 CDC34P49427 236 aaPredicted RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 OR4A16Q8NH70 328 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 PKIBQ9C010 78 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 A0A087WWC5 75 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 A0A1B0GW64 132 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 SPRY3O43610 288 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 COX5BP10606 129 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 CEACAM1P13688 526 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 SERF2P84101 59 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 LSM10Q969L4 123 aaKnown RBP11.32□□□□□ -0.6
VHL-201ENST00000256474 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 HIST1H2BLQ99880 126 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 TMEM147Q9BVK8 224 aa11.32□□□□□ -0.6
VHL-201ENST00000256474 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
VHL-201ENST00000256474 DVL1O14640 695 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 MLNRO43193 412 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 ACP1P24666 158 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 ZNF83P51522 516 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 PNRC1Q12796 327 aaPredicted RBP11.31□□□□□ -0.6
VHL-201ENST00000256474 Q8NFD4 153 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 R3HDM4Q96D70 268 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 C5orf30Q96GV9 206 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 DMRT1Q9Y5R6 373 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 GNG10P50151 68 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 Q6ZS49 121 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 TNCP24821 2201 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 MYOD1P15172 320 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 C1QL4Q86Z23 238 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
VHL-201ENST00000256474 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 FOSL1P15407 271 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 FOXF2Q12947 444 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 COQ2Q96H96 371 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 NPCDR1Q9BY65 106 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 SPINT2O43291 252 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 IER2Q9BTL4 223 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
VHL-201ENST00000256474 SLC35B1P78383 322 aa11.3□□□□□ -0.6
VHL-201ENST00000256474 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 NRN1LQ496H8 165 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 Q8IYB0 196 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 OR2T10Q8NGZ9 312 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 SH3BGRL2Q9UJC5 107 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 B4DEV8 164 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 AQP7O14520 342 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 KBTBD11O94819 623 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 DPPA3Q6W0C5 159 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
VHL-201ENST00000256474 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 ZPBPQ9BS86 351 aa11.29□□□□□ -0.6
VHL-201ENST00000256474 PSMG3Q9BT73 122 aaPredicted RBP11.29□□□□□ -0.6
VHL-201ENST00000256474 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
VHL-201ENST00000256474 ZNF729A6NN14 1252 aaPredicted RBP11.28□□□□□ -0.6
VHL-201ENST00000256474 ERVK-16P61578 105 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms