RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PARLQ9H300 379 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 DMRT1Q9Y5R6 373 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 APCSP02743 223 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 HOXB1P14653 301 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 USF1P22415 310 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 UBE2L3P68036 154 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 PSG5Q15238 335 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 NUP210LQ5VU65 1888 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TGIF2LXQ8IUE1 241 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CLDND2Q8NHS1 167 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ANAPC16Q96DE5 110 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 MRPL18Q9H0U6 180 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR2H2O95918 312 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CSN3P07498 182 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FOSL1P15407 271 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF137PP52743 207 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FLYWCH2Q96CP2 140 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 HS3ST6Q96QI5 342 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TTTY12Q9BZ98 90 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 IL36GQ9NZH8 169 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 IGLV3-12A0A075B6K2 115 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 A0A1W2PRD5 423 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 A0A1W2PRF3 423 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 A0A1W2PRM7 423 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CBY3A6NI87 242 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 RANP62826 216 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ZIC4Q8N9L1 334 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ZDHHC16Q969W1 377 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR51B2Q9Y5P1 312 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SPAARA0A1B0GVQ0 90 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ODAMA1E959 279 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 KBTBD11O94819 623 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CXCL1P09341 107 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FOLR2P14207 255 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 HIST3H3Q16695 136 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SLC25A53Q5H9E4 307 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FA2HQ7L5A8 372 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR1L4Q8NGR5 311 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ELOVL1Q9BW60 279 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 NCKAP5O14513 1909 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TCF23Q7RTU1 214 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 BMPERQ8N8U9 685 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SIGLEC12Q96PQ1 595 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 PKIBQ9C010 78 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 NGBQ9NPG2 151 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CBLN4Q9NTU7 201 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SLC45A2Q9UMX9 530 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 WIPI2Q9Y4P8 454 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TMSB15BA0A087X1C1 80 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CELA3BP08861 270 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR10J1P30954 320 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SRP14P37108 136 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TMEM56Q96MV1 263 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 PRDM14Q9GZV8 571 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 PNRC2Q9NPJ4 139 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TECRQ9NZ01 308 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 TMEM56-RWDD3S4R434 201 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CCDC168Q8NDH2 2452 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 WIPF3A6NGB9 483 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 S1PR2O95136 353 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SLC25A5P05141 298 aaKnown RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 SPCS3P61009 180 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FXYD3Q14802 87 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ATOH7Q8N100 152 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 TMEM171Q8WVE6 324 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PSMG3Q9BT73 122 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 VSIRQ9H7M9 311 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 J3QR06 171 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 NEURL1O76050 574 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 RBP4P02753 201 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CD1BP29016 333 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 LYZP61626 148 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 CDX2Q99626 313 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 PILRBQ9UKJ0 227 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A10PA6NDY2 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A18PA6NE21 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A16PA6NEW6 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A20PA6NIJ5 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A8PA6NJQ4 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A7PA6NKC0 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF729A6NN14 1252 aaPredicted RBP3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A22PA8MWA6 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A12PA8MX19 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A5PA8MXJ8 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A23PA8MXZ1 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 NDUFB3O43676 98 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A15PP0C7V4 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A13PP0C7W8 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A14PP0C7W9 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 FAM90A24PP0C7X0 464 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 WNT5AP41221 380 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 HEPN1Q6WQI6 88 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 C1orf210Q8IVY1 113 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 OR4C5Q8NGB2 326 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 OR4X1Q8NH49 305 aa3.91□□□□□ -1.78
VPS13C-201ENST00000249837 VPS25Q9BRG1 176 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms