RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 THBS3P49746 956 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 TAS2R19P59542 299 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 PYDC2Q56P42 97 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 ARSJQ5FYB0 599 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-245ENST00000621399 RNASE10Q5GAN6 216 aaKnown RBP14.8□□□□□ -0.04
CIRBP-245ENST00000621399 SPANXN2Q5MJ10 180 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 VAX1Q5SQQ9 334 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 ZNF660Q6AZW8 331 aaPredicted RBP14.8□□□□□ -0.04
CIRBP-245ENST00000621399 C11orf88Q6PI97 169 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 TMEM17Q86X19 198 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 TMEM229BQ8NBD8 167 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 RITA1Q96K30 269 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 ZNF702PQ9H963 129 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 CCL28Q9NRJ3 127 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 RBMX2Q9Y388 322 aaKnown RBP14.8□□□□□ -0.04
CIRBP-245ENST00000621399 MMP24Q9Y5R2 645 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 V9GYH0 126 aa14.8□□□□□ -0.04
CIRBP-245ENST00000621399 SH2D7A6NKC9 451 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-245ENST00000621399 FGF16O43320 207 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 IGLV2-14P01704 120 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 AMY1AP04745 511 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 AMY2AP04746 511 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 CSF1P09603 554 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 TBPP20226 339 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 DUTP33316 252 aaKnown RBP14.79□□□□□ -0.04
CIRBP-245ENST00000621399 F2RL1P55085 397 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 MMDQ15546 238 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 C5orf56Q8N8D9 126 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 MOB3AQ96BX8 217 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 ADTRPQ96IZ2 230 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 TINAGL1Q9GZM7 467 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-245ENST00000621399 PLSCR3Q9NRY6 295 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 SLC35D1Q9NTN3 355 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 ZNF107Q9UII5 783 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-245ENST00000621399 RNF114Q9Y508 228 aa14.79□□□□□ -0.04
CIRBP-245ENST00000621399 PTBP1P26599 531 aaKnown RBP eCLIP14.78□□□□□ -0.04
CIRBP-245ENST00000621399 ETV6P41212 452 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 TAGLNQ01995 201 aaKnown RBP14.78□□□□□ -0.04
CIRBP-245ENST00000621399 MSMO1Q15800 293 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 CNPY1Q3B7I2 92 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 C9orf152Q5JTZ5 239 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 STEAP1BQ6NZ63 245 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 Q6ZS46 218 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 PDPNQ86YL7 162 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 Q8N2B8 174 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 SPATA3Q8NHX4 192 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 RASL11BQ9BPW5 248 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 THAP7Q9BT49 309 aaPredicted RBP14.78□□□□□ -0.04
CIRBP-245ENST00000621399 TAS2R8Q9NYW2 309 aa14.78□□□□□ -0.04
CIRBP-245ENST00000621399 TENM1Q9UKZ4 2725 aa14.77□□□□□ -0.04
CIRBP-245ENST00000621399 LINC00473A8K010 186 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 HAX1O00165 279 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 RAB3DO95716 219 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 CD74P04233 296 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 IGKV1-16P04430 117 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 CBX3Q13185 183 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 RTL8BQ17RB0 113 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 C3orf56Q8N813 242 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 Q8N9W7 124 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 ZBTB34Q8NCN2 500 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 BVESQ8NE79 360 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 BORCS5Q969J3 196 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 FLYWCH2Q96CP2 140 aaKnown RBP14.77□□□□□ -0.05
CIRBP-245ENST00000621399 HSD17B10Q99714 261 aaKnown RBP14.77□□□□□ -0.05
CIRBP-245ENST00000621399 RNF5Q99942 180 aa14.77□□□□□ -0.05
CIRBP-245ENST00000621399 NBR2O15453 112 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 TNFSF12O43508 249 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 PEX14O75381 377 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 RRASP10301 218 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 CNTFRP26992 372 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 GNRHRP30968 328 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 RPS16P62249 146 aaKnown RBP14.76□□□□□ -0.05
CIRBP-245ENST00000621399 ZNF79Q15937 498 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 ZNF66Q6ZN08 573 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 KCTD9Q7L273 389 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 Q8N402 240 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 ARRDC1Q8N5I2 433 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 OR4D10Q8NGI6 311 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 DDB2Q92466 427 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 LIN7CQ9NUP9 197 aaKnown RBP14.76□□□□□ -0.05
CIRBP-245ENST00000621399 KIAA1456Q9P272 454 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 PRELID3BQ9Y3B1 194 aa14.76□□□□□ -0.05
CIRBP-245ENST00000621399 AKAIN1P0CW23 69 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 VDAC2P45880 294 aaPredicted RBP14.75□□□□□ -0.05
CIRBP-245ENST00000621399 RPL30P62888 115 aaKnown RBP14.75□□□□□ -0.05
CIRBP-245ENST00000621399 EIF4EBP1Q13541 118 aaPredicted RBP14.75□□□□□ -0.05
CIRBP-245ENST00000621399 MEF2DQ14814 521 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 LPCAT3Q6P1A2 487 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 ZNF818PQ6ZRF7 136 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 MFSD4AQ8N468 514 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 FAM71E2Q8N5Q1 922 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 NPBQ8NG41 125 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 TCTEX1D2Q8WW35 142 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 GPHA2Q96T91 129 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 FXYD6Q9H0Q3 95 aa14.75□□□□□ -0.05
CIRBP-245ENST00000621399 ANKRD20A5PA0PJZ0 165 aa14.74□□□□□ -0.05
CIRBP-245ENST00000621399 PROK1P58294 105 aa14.74□□□□□ -0.05
CIRBP-245ENST00000621399 OR2B11Q5JQS5 317 aa14.74□□□□□ -0.05
CIRBP-245ENST00000621399 TSNAXQ99598 290 aaKnown RBP14.74□□□□□ -0.05
CIRBP-245ENST00000621399 SERTAD4Q9NUC0 356 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms