RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SPATA46Q5T0L3 261 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ATAD3CQ5T2N8 411 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ELP2Q6IA86 826 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR2T2Q6IF00 324 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ASCL4Q6XD76 172 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 IDO2Q6ZQW0 420 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SLC25A26Q70HW3 274 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SLC25A42Q86VD7 318 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZDHHC22Q8N966 263 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 WDR31Q8NA23 367 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 TMEM104Q8NE00 496 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR8G5Q8NG78 346 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR51S1Q8NGJ8 323 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR10K1Q8NGX5 313 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR13G1Q8NGZ3 307 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR4K15Q8NH41 348 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SLC25A40Q8TBP6 338 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ASB13Q8WXK3 278 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR5P3Q8WZ94 311 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 EMG1Q92979 244 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 S100PBPQ96BU1 408 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SNRNP40Q96DI7 357 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 ARHGAP5-AS1Q96IT6 56 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 RADILQ96JH8 1075 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CMSS1Q9BQ75 279 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 NICN1Q9BSH3 213 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR2J1Q9GZK6 312 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 CXXC4Q9H2H0 198 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 OR51J1Q9H342 316 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 RIMS4Q9H426 269 aaPredicted RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZNF442Q9H7R0 627 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZNF286AQ9HBT8 521 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 TMEM100Q9NV29 134 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 NECAP2Q9NVZ3 263 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SH3BGRL2Q9UJC5 107 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 PURGQ9UJV8 347 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZNF222Q9UK12 451 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 MGAT4AQ9UM21 535 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 C14orf166Q9Y224 244 aaKnown RBP3.81□□□□□ -1.8
VPS29-212ENST00000621131 ZNF835Q9Y2P0 537 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 SLC25A15Q9Y619 301 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
VPS29-212ENST00000621131 IGHV2OR16-5A0A0B4J2B6 119 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 IGHV1-18A0A0C4DH31 117 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 KIR2DS1A0A191URI9 304 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 C7orf66A4D0T2 115 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 A8MV72 311 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 BOLA2-SMG1P6H3BVE0 249 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 TRIM77I1YAP6 450 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SH2D1BO14796 132 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SOCS1O15524 211 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ANGPTL7O43827 346 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 OR7C1O76099 320 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 TOXO94900 526 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 NXPH4O95158 308 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 PMP2P02689 132 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 IL5P05113 134 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 CSN2P05814 226 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 GLAP06280 429 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ZNF35P13682 527 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 PGAM2P15259 253 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 PRKACAP17612 351 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 C4BPBP20851 252 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 KITLGP21583 273 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 PTAFRP25105 342 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 S100GP29377 79 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 HRH1P35367 487 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 KIR2DS4P43632 304 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ASCL1P50553 236 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SNU13P55769 128 aaKnown RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 KLF3P57682 345 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 UBE2MP61081 183 aaKnown RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 FGF12P61328 243 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 NAAAQ02083 359 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 DHODHQ02127 395 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS29-212ENST00000621131 KIR2DS1Q14954 304 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 CDK10Q15131 360 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SURF2Q15527 256 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 TSC22D1Q15714 1073 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 GRK1Q15835 563 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 RNF212Q495C1 297 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 PRR30Q53SZ7 412 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 NHLRC3Q5JS37 347 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 SPIN3Q5JUX0 258 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 VAX1Q5SQQ9 334 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 FAHD2BQ6P2I3 314 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 HAGHLQ6PII5 290 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 MOB1BQ7L9L4 216 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 TMED4Q7Z7H5 227 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 DOLPP1Q86YN1 238 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 FAM58AQ8N1B3 248 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ST6GALNAC3Q8NDV1 305 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 BEST4Q8NFU0 473 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 ZFAND1Q8TCF1 268 aa3.8□□□□□ -1.8
VPS29-212ENST00000621131 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
VPS29-212ENST00000621131 FAHD2AQ96GK7 314 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms