RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SEC14L6B5MCN3 397 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 CA2P00918 260 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 RUNX1Q01196 453 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 C9orf66Q5T8R8 295 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 PDPNQ86YL7 162 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 OR10J5Q8NHC4 309 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 ATG5Q9H1Y0 275 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 SDHAF2Q9NX18 166 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 FOXA2Q9Y261 457 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-203ENST00000620514 IGKV1D-8A0A087WSZ0 117 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 METTL21EPA6NDL7 271 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 SLC25A17O43808 307 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 APOA2P02652 100 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 FGF9P31371 208 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-203ENST00000620514 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 ARFRP1Q13795 201 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 C11orf87Q6NUJ2 197 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 PPP1R27Q86WC6 154 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-203ENST00000620514 TSNAXQ99598 290 aaKnown RBP13.31□□□□□ -0.28
HMGN3-203ENST00000620514 Q9H521 79 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 STUB1Q9UNE7 303 aa13.31□□□□□ -0.28
HMGN3-203ENST00000620514 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
HMGN3-203ENST00000620514 OR8U8P0C7N1 319 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 TALDO1P37837 337 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 ZNF260Q3ZCT1 412 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 CDNFQ49AH0 187 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 UNQ5815/PRO19632Q6UWF5 114 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 ZNF562Q6V9R5 426 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 FCGR1BQ92637 280 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 FLYWCH2Q96CP2 140 aaKnown RBP13.3□□□□□ -0.28
HMGN3-203ENST00000620514 PRR25Q96S07 402 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 YTHDF1Q9BYJ9 559 aaKnown RBP13.3□□□□□ -0.28
HMGN3-203ENST00000620514 OR51E2Q9H255 320 aa13.3□□□□□ -0.28
HMGN3-203ENST00000620514 SPDEFO95238 335 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 ECI1P42126 302 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 TMEM267Q0VDI3 215 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-203ENST00000620514 ACTBL2Q562R1 376 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 ZNF773Q6PK81 442 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 TCTEX1D1Q8N7M0 179 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 DCUN1D4Q92564 292 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 MS4A10Q96PG2 267 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 GINS4Q9BRT9 223 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 RNF167Q9H6Y7 350 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 DAPK2Q9UIK4 370 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 SSR3Q9UNL2 185 aa13.29□□□□□ -0.28
HMGN3-203ENST00000620514 RAMP3O60896 148 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 DIRAS3O95661 229 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 IGHV3-11P01762 117 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 CLEC2LP0C7M8 214 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 SLURP1P55000 103 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 SSBP2P81877 361 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-203ENST00000620514 PJVKQ0ZLH3 352 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 FXYD3Q14802 87 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 AKIRIN2Q53H80 203 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 Q6ZS49 121 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 H1FOOQ8IZA3 346 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-203ENST00000620514 BVESQ8NE79 360 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 GRPEL2Q8TAA5 225 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 B9D2Q9BPU9 175 aa13.28□□□□□ -0.28
HMGN3-203ENST00000620514 ZMAT5Q9UDW3 170 aaKnown RBP13.28□□□□□ -0.28
HMGN3-203ENST00000620514 RRP15Q9Y3B9 282 aaKnown RBP13.28□□□□□ -0.28
HMGN3-203ENST00000620514 RBM7Q9Y580 266 aaKnown RBP13.28□□□□□ -0.28
HMGN3-203ENST00000620514 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 A0A087WW49 117 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 J3QRK9 145 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 CRYGBP07316 175 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 LGALS1P09382 135 aaKnown RBP13.27□□□□□ -0.29
HMGN3-203ENST00000620514 DTYMKP23919 212 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 SDC2P34741 201 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 CD69Q07108 199 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
HMGN3-203ENST00000620514 SFXN4Q6P4A7 337 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 LGALS14Q8TCE9 139 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 NUDCD2Q8WVJ2 157 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 DLX4Q92988 240 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-203ENST00000620514 ST6GALNAC5Q9BVH7 336 aa13.27□□□□□ -0.29
HMGN3-203ENST00000620514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.27□□□□□ -0.29
HMGN3-203ENST00000620514 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
HMGN3-203ENST00000620514 OVOL1O14753 267 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 TPPP2P59282 170 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 MXD1Q05195 221 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 ARL6IP1Q15041 203 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 HACD4Q5VWC8 232 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 PYHIN1Q6K0P9 492 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 HARBI1Q96MB7 349 aa13.26□□□□□ -0.29
HMGN3-203ENST00000620514 LINC00473A8K010 186 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 LINC01619G3V211 115 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 CNIH1O95406 144 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 DUTP33316 252 aaKnown RBP13.25□□□□□ -0.29
HMGN3-203ENST00000620514 LGALS7P47929 136 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 TMEM177Q53S58 311 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms