RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 J3QR06 171 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 CHRNB4P30926 498 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 ITLN1Q8WWA0 313 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 BCL2L2Q92843 193 aaPredicted RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 NPVFQ9HCQ7 196 aa11.82□□□□□ -0.52
CNOT3-210ENST00000618939 CISD1Q9NZ45 108 aaKnown RBP11.82□□□□□ -0.52
CNOT3-210ENST00000618939 WNT9BO14905 357 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 SMPD2O60906 423 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 MPDU1O75352 247 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 HSBP1O75506 76 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 FOXC1Q12948 553 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 HFEQ30201 348 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF506Q5JVG8 444 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF71Q9NQZ8 489 aaPredicted RBP11.81□□□□□ -0.52
CNOT3-210ENST00000618939 A0A1W2PN81 502 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 C9orf172C9J069 976 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 CSN1S1P47710 185 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 USB1Q9BQ65 265 aaKnown RBP11.81□□□□□ -0.52
CNOT3-210ENST00000618939 FAM117AQ9C073 453 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 CLCF1Q9UBD9 225 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 PXMP4Q9Y6I8 212 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 LRRK1Q38SD2 2015 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 SSTR5P35346 364 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 ETFRF1Q6IPR1 90 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 LRTM2Q8N967 370 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 RPEQ96AT9 228 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 C12orf77C9JDV5 145 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 CLN5O75503 358 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
CNOT3-210ENST00000618939 RPEL1Q2QD12 228 aa11.81□□□□□ -0.52
CNOT3-210ENST00000618939 RCC1LQ96I51 464 aaKnown RBP11.81□□□□□ -0.52
CNOT3-210ENST00000618939 TGIF2-C20orf24A0A0A6YYL0 155 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 H0Y8G0 127 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 NEURL1O76050 574 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 PMCHP20382 165 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 SLC35E4Q6ICL7 350 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 RND1Q92730 232 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
CNOT3-210ENST00000618939 AUP1Q9Y679 476 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF106Q9H2Y7 1883 aaKnown RBP11.8□□□□□ -0.52
CNOT3-210ENST00000618939 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 CCL13Q99616 98 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 ETV2O00321 342 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-210ENST00000618939 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
CNOT3-210ENST00000618939 PGA5P0DJD9 388 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 RPL31P62899 125 aaKnown RBP11.8□□□□□ -0.52
CNOT3-210ENST00000618939 CCL8P80075 99 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF383Q8NA42 475 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 DOCK7Q96N67 2140 aa11.8□□□□□ -0.52
CNOT3-210ENST00000618939 FOXG1P55316 489 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-210ENST00000618939 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 RNF2Q99496 336 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 OR51B2Q9Y5P1 312 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 NDUFB4O95168 129 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 CRISP2P16562 243 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 COX7A1P24310 79 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 FLYWCH2Q96CP2 140 aaKnown RBP11.79□□□□□ -0.52
CNOT3-210ENST00000618939 TMEM204Q9BSN7 226 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 IGKV3D-15A0A087WSY6 115 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 GATCO43716 136 aaKnown RBP11.79□□□□□ -0.52
CNOT3-210ENST00000618939 SRP19P09132 144 aaKnown RBP11.79□□□□□ -0.52
CNOT3-210ENST00000618939 ORM2P19652 201 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 FAM3BP58499 235 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-210ENST00000618939 PSG7Q13046 419 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 TGIF2LYQ8IUE0 185 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 SGMS2Q8NHU3 365 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 C1orf185Q5T7R7 199 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 JPT1Q9UK76 154 aa11.79□□□□□ -0.52
CNOT3-210ENST00000618939 TCL1AP56279 114 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 OR1L8Q8NGR8 309 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 BLNKQ8WV28 456 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
CNOT3-210ENST00000618939 RBP4P02753 201 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 SUMO1P63165 101 aaKnown RBP11.78□□□□□ -0.52
CNOT3-210ENST00000618939 PAX5Q02548 391 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 CELA3BP08861 270 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 CCKARP32238 428 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 PRRX1P54821 245 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 ID3Q02535 119 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
CNOT3-210ENST00000618939 BMPERQ8N8U9 685 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms