RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 A0A1B0GW64 132 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 MARCH11A6NNE9 402 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 ZNF727A8MUV8 499 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 H2BFWTQ7Z2G1 175 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 H3BQ15 152 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 SLC31A2O15432 143 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 FCGR3BO75015 233 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 IGKV1D-33P01593 117 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 IGKV1-33P01594 117 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 GLRXP35754 106 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 GPR12P47775 334 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 HABP2Q14520 560 aaPredicted RBP16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 TMEM14EPQ6UXP3 125 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 COA4Q9NYJ1 87 aa16.42■□□□□ 0.22
SMARCD2-212ENST00000613943 CYB5R3P00387 301 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 DEFA4P12838 97 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 MORN2Q502X0 79 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 C1orf229Q6ZS94 237 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 FAM169BQ8N8A8 192 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 C15orf54Q8N8G6 183 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 RCC1LQ96I51 464 aaKnown RBP16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 TOLLIPQ9H0E2 274 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 OR9G9P0C7N8 305 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 RAB2AP61019 212 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 MSMO1Q15800 293 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 ZNF787Q6DD87 383 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 DTD1Q8TEA8 209 aa16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 QTRT1Q9BXR0 403 aaKnown RBP16.41■□□□□ 0.22
SMARCD2-212ENST00000613943 BTBD17A6NE02 478 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 PPIHO43447 177 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 CLDN14O95500 239 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 CCKARP32238 428 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 ZGRF1Q86YA3 2104 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 ZCCHC24Q8N2G6 241 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 Q8TCH9 128 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 TAF15Q92804 592 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 RAB39BQ96DA2 213 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 DSCAMO60469 2012 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 FAM90A26D6RGX4 464 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 M0R1X1 148 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 DUTP33316 252 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 RPS23P62266 143 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 HTD2P86397 168 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 ZNF506Q5JVG8 444 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 SNRNP40Q96DI7 357 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 ABHD17AQ96GS6 310 aa16.4■□□□□ 0.22
SMARCD2-212ENST00000613943 CEBPZOSA8MTT3 80 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 MGST3O14880 152 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 TIMP3P35625 211 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 TFF3Q07654 80 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 MZT1Q08AG7 82 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 R3HDM4Q96D70 268 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 SNX22Q96L94 193 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 A8MXE2 369 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 NDUFA2O43678 99 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 ADH4P08319 380 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 EIF2S3P41091 472 aaKnown RBP16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 LOXL3P58215 753 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 ACSM6Q6P461 480 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 ZNF429Q86V71 674 aa16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 CISD2Q8N5K1 135 aaKnown RBP16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 HSD17B10Q99714 261 aaKnown RBP16.39■□□□□ 0.21
SMARCD2-212ENST00000613943 PMS2P5A8MQ11 134 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 LHBP01229 141 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 RAB11AP62491 216 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 RHEBQ15382 184 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 ZNF66Q6ZN08 573 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 RPP25LQ8N5L8 163 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 FAM57AQ8TBR7 257 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 GCM1Q9NP62 436 aa16.38■□□□□ 0.21
SMARCD2-212ENST00000613943 IGLV3-9A0A075B6K5 115 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 TRAV3A0A0B4J244 114 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 LOC102723971A0A1B0GUV8 181 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 HBE1P02100 147 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 CRYABP02511 175 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 ERVFRD-1P60508 538 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 ADAM5Q6NVV9 412 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 DPPA3Q6W0C5 159 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 FAM90A1Q86YD7 464 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 SFXN3Q9BWM7 321 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 IFI27L2Q9H2X8 130 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 TP53TG5Q9Y2B4 290 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 RAB29O14966 203 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 IGHV1-46P01743 117 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 HSPB1P04792 205 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 GZMHP20718 246 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 CD40P25942 277 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 CEACAM8P31997 349 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 DLK1P80370 383 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 TNFAIP6P98066 277 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 ZNF343Q6P1L6 599 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 C1orf174Q8IYL3 243 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 PSMG3Q9BT73 122 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 TMPRSS5Q9H3S3 457 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 SLC25A22Q9H936 323 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 CALYQ9NYX4 217 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 URGCP-MRPS24S4R325 110 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 PKDREJQ9NTG1 2253 aa16.37■□□□□ 0.21
SMARCD2-212ENST00000613943 A0A0G2JNJ9 132 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms