RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 CYC1P08574 325 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 CSN1S1P47710 185 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 MEF2BQ02080 365 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 PNRC1Q12796 327 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 KRTCAP3Q53RY4 240 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 KHDC3LQ587J8 217 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 LHFPL4Q7Z7J7 247 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 OR8I2Q8N0Y5 310 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 DRAM1Q8N682 238 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 OR4X1Q8NH49 305 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 OR4S2Q8NH73 311 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TMEM54Q969K7 222 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 RAB24Q969Q5 203 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 CYYR1Q96J86 154 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HARBI1Q96MB7 349 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 IMMP2LQ96T52 175 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 QTRT1Q9BXR0 403 aaKnown RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 REG4Q9BYZ8 158 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 MANBALQ9NQG1 85 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 CBLN4Q9NTU7 201 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 SLC45A2Q9UMX9 530 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 OR51B2Q9Y5P1 312 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TCF20Q9UGU0 1960 aaKnown RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 SCN8AQ9UQD0 1980 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 CTXND1A0A1B0GTU2 59 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 E9PLN8 166 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 J3QR06 171 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 ARL14EPLP0DKL9 152 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 NPY1RP25929 384 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 ARL16Q0P5N6 197 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HLA-DRB5Q30154 266 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 KHDC1LQ5JSQ8 128 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 H1FOOQ8IZA3 346 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 FAM131CQ96AQ9 280 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 RPEQ96AT9 228 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 FAM122AQ96E09 287 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 WASHC3Q9Y3C0 194 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 WIPI2Q9Y4P8 454 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 NCOR1O75376 2440 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 ELOA3CA0A087WX78 387 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 LOC389332A0A1B0GUA5 103 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PINLYPA6NC86 204 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PGPEP1LA6NFU8 196 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 MARCH11A6NNE9 402 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 K7ESF4 209 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 NEURL1O76050 574 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 UMODP07911 640 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HTR1DP28221 377 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 TMEM183BQ1AE95 376 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 VMA21Q3ZAQ7 101 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 GFI1BQ5VTD9 330 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 ST6GALNAC3Q8NDV1 305 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 KLF14Q8TD94 323 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 Q8WTZ3 238 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 ITLN1Q8WWA0 313 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 VOPP1Q96AW1 172 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 DMRTA2Q96SC8 542 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HSPB9Q9BQS6 159 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 SSBP3Q9BWW4 388 aaPredicted RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 FAM117AQ9C073 453 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PARLQ9H300 379 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 GSN-AS1Q9NRJ2 163 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 DEPPQ9NTK1 212 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TUBD1Q9UJT1 453 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PLXND1Q9Y4D7 1925 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 hCG_38984A0A1B0GV85 526 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 F8VVB4 439 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 F8VWA3 439 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 SLC17A3O00476 420 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 RAMP3O60896 148 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 FGF5P12034 268 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 TNFRSF1AP19438 455 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 GATA2P23769 480 aaPredicted RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 OR10J1P30954 320 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 SUPT4H1P63272 117 aaKnown RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 TNFRSF9Q07011 255 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 PEAR1Q5VY43 1037 aaPredicted RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 TEPPQ6URK8 271 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 PQLC2Q6ZP29 291 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 PPP1R32Q7Z5V6 425 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 ZNF645Q8N7E2 425 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 NFAM1Q8NET5 270 aaPredicted RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 OR5AU1Q8NGC0 362 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 BCL2L2Q92843 193 aaPredicted RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 FGF11Q92914 225 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 TMEM56Q96MV1 263 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 MRPL13Q9BYD1 178 aaKnown RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 SAP30LQ9HAJ7 183 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 SIRT7Q9NRC8 400 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 PITPNC1Q9UKF7 332 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 ZDHHC8Q9ULC8 765 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 S4R3C0 116 aa3.23□□□□□ -1.89
RNF38-210ENST00000611646 SNRNP200O75643 2136 aaKnown RBP3.23□□□□□ -1.89
RNF38-210ENST00000611646 IGKV1-27A0A075B6S5 117 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms