RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 MED29Q9NX70 200 aa3.36□□□□□ -1.87
LINC00397-202ENST00000606785 LRP4O75096 1905 aa3.36□□□□□ -1.87
LINC00397-202ENST00000606785 TNS3Q68CZ2 1445 aa3.36□□□□□ -1.87
LINC00397-202ENST00000606785 NCOA2Q15596 1464 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 EPRSP07814 1512 aaKnown RBP3.35□□□□□ -1.87
LINC00397-202ENST00000606785 DISP1Q96F81 1524 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 MYH3P11055 1940 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 A0A087WXM4 84 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 A0A096LNJ9 63 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 PNMA8CA0A1B0GUJ8 204 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 A0A1W2PRE2 83 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 OR5H1A6NKK0 313 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 TAAR5O14804 337 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 MFSD11O43934 449 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CD2P06729 351 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 AZU1P20160 251 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CRHBPP24387 322 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 KDELR1P24390 212 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 GRPRP30550 384 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 GALR1P47211 349 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 TAS2R30P59541 319 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 RAB8AP61006 207 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CRADDP78560 199 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 RUNX1Q01196 453 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CAV1Q03135 178 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 RHEBQ15382 184 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 LRRC75BQ2VPJ9 315 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CLEC12AQ5QGZ9 265 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 LDLRAD2Q5SZI1 272 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 MUC15Q8N387 334 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 TSTD1Q8NFU3 115 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 OR13C8Q8NGS7 320 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 RXFP4Q8TDU9 374 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 GPR82Q96P67 336 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 RBP7Q96R05 134 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 OR2M4Q96R27 311 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 TAPBPLQ9BX59 468 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 SLC25A39Q9BZJ4 359 aaPredicted RBP3.35□□□□□ -1.87
LINC00397-202ENST00000606785 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 TRAPPC2LQ9UL33 140 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 WSB1Q9Y6I7 421 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CROCC2H7BZ55 1655 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 BCORL1Q5H9F3 1711 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 ADAMTS13Q76LX8 1427 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 CACNA1SQ13698 1873 aa3.35□□□□□ -1.87
LINC00397-202ENST00000606785 DENND4BO75064 1496 aaPredicted RBP3.35□□□□□ -1.87
LINC00397-202ENST00000606785 MYH1P12882 1939 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 ZC3H13Q5T200 1668 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 CDC42BPAQ5VT25 1732 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 A0A087WUJ7 227 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 A0A087WX48 190 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 BORCS7-ASMTA0A0B4J1R7 106 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 FAM159BA6NKW6 160 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 M0R1B8 84 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 TNFRSF11BO00300 401 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 UPK1AO00322 258 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 ZNF593O00488 134 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 PDCD5O14737 125 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 HMGB3O15347 200 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 RBFOX2O43251 390 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 REM1O75628 298 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 OR7C1O76099 320 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 P01737 135 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 APOC3P02656 99 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 SMIM17P0DL12 118 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 SULT1A3P0DMM9 295 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 SULT1A4P0DMN0 295 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 PSG2P11465 335 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 RPL12P30050 165 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 POLR2IP36954 125 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 TAS2R31P59538 309 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 RHOGP84095 191 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 IFITM3Q01628 133 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 PLCXD2Q0VAA5 305 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 MORN2Q502X0 79 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 C2orf83Q53S99 150 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 MESTQ5EB52 335 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 FAM162BQ5T6X4 162 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 AGTRAPQ6RW13 159 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 Q6ZT83 130 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 SVBPQ8N300 66 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 SPPL2BQ8TCT7 592 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 RAB2BQ8WUD1 216 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 APOBEC3DQ96AK3 386 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 ADTRPQ96IZ2 230 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 EFCAB11Q9BUY7 163 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 EMC6Q9BV81 110 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 METTL17Q9H7H0 456 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 CXorf21Q9HAI6 301 aa3.34□□□□□ -1.87
LINC00397-202ENST00000606785 RBFOX1Q9NWB1 397 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 MRPL16Q9NX20 251 aaKnown RBP3.34□□□□□ -1.87
LINC00397-202ENST00000606785 FAM206AQ9NX38 181 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms