RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
SHANK2-219ENST00000606715 APCDD1LQ8NCL9 501 aa9.48□□□□□ -0.89
SHANK2-219ENST00000606715 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
SHANK2-219ENST00000606715 PKIBQ9C010 78 aa9.48□□□□□ -0.89
SHANK2-219ENST00000606715 CXorf1O96002 111 aa9.48□□□□□ -0.89
SHANK2-219ENST00000606715 ZFP36L1Q07352 338 aaKnown RBP9.48□□□□□ -0.89
SHANK2-219ENST00000606715 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
SHANK2-219ENST00000606715 CLDN34H7C241 214 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 MBPP02686 304 aaPredicted RBP9.47□□□□□ -0.89
SHANK2-219ENST00000606715 P2RY1P47900 373 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 COMPP49747 757 aaPredicted RBP9.47□□□□□ -0.89
SHANK2-219ENST00000606715 TIMM23BQ5SRD1 257 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 SEZ6L2Q6UXD5 910 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 UNQ6494/PRO21346Q6UXR6 183 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 LOC102723996A0A087X1L8 192 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 ZPLD1Q8TCW7 415 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 ZNF703Q9H7S9 590 aaPredicted RBP9.47□□□□□ -0.89
SHANK2-219ENST00000606715 DUXBA0A1W2PPF3 345 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 Q6ZT83 130 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 SLC35E3Q7Z769 313 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 CD59P13987 128 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 PSG9Q00887 426 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 C10orf128Q5T292 105 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 TEX261Q6UWH6 196 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 LDLRAD3Q86YD5 345 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 ODAMA1E959 279 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
SHANK2-219ENST00000606715 BSPH1Q075Z2 132 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 INSL4Q14641 139 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 TMEM106BQ9NUM4 274 aa9.47□□□□□ -0.89
SHANK2-219ENST00000606715 IGLV1-36A0A0B4J1U3 117 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 HIST3H3Q16695 136 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 TMEM255AQ5JRV8 349 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 OR2D3Q8NGH3 330 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 ZDBF2Q9HCK1 2354 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 NKX2-6A6NCS4 301 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 NPFFO15130 113 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 SAXO1Q8IYX7 474 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 ZNF502Q8TBZ5 544 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 IFT22Q9H7X7 185 aa9.46□□□□□ -0.89
SHANK2-219ENST00000606715 M0R143 59 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
SHANK2-219ENST00000606715 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 OR10J1P30954 320 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 TMEM33P57088 247 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 ZNF56Q15929 161 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 LRRC75AQ8NAA5 344 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 SH3BGRL3Q9H299 93 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 CHCHD2Q9Y6H1 151 aaPredicted RBP9.46□□□□□ -0.9
SHANK2-219ENST00000606715 RECKO95980 971 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
SHANK2-219ENST00000606715 IL11P20809 199 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 TNFSF10P50591 281 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 FGF12P61328 243 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 C1QTNF12Q5T7M4 302 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
SHANK2-219ENST00000606715 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
SHANK2-219ENST00000606715 TCRBV4S1A1TA0A5B7 111 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 PPP1R17O96001 155 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 SELENOTP62341 195 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 CX3CL1P78423 397 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
SHANK2-219ENST00000606715 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 GTSCR1Q86UQ5 136 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 GALNT14Q96FL9 552 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 ZNF729A6NN14 1252 aaPredicted RBP9.45□□□□□ -0.9
SHANK2-219ENST00000606715 PRSS2P07478 247 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 GZMKP49863 264 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 ERVS71-1P61550 626 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 ST6GALNAC2Q9UJ37 374 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 ISLRO14498 428 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 VSIG8P0DPA2 414 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 SMUG1Q53HV7 270 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 MRPL54Q6P161 138 aaKnown RBP9.45□□□□□ -0.9
SHANK2-219ENST00000606715 PHYHIPLQ96FC7 376 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 ATG101Q9BSB4 218 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 MMP26Q9NRE1 261 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 AHCTF1Q8WYP5 2266 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 UQCC3Q6UW78 93 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 OR8A1Q8NGG7 326 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 TMEM191AQ9H0A3 160 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 PRR13Q9NZ81 148 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 NAT8Q9UHE5 227 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 NUP214P35658 2090 aaPredicted RBP9.45□□□□□ -0.9
SHANK2-219ENST00000606715 LINC00869P0C866 280 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 RND2P52198 227 aa9.45□□□□□ -0.9
SHANK2-219ENST00000606715 C3orf56Q8N813 242 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms