RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CD300LFQ8TDQ1 290 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 BARX1Q9HBU1 254 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 IGKV1-39P01597 117 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 IGKV1D-39P04432 117 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 LIPFP07098 398 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 PET100P0DJ07 73 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 RAB32Q13637 225 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 RPL39P5Q59GN2 51 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 NMSQ5H8A3 153 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 SPAG16Q8N0X2 631 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 LINC00311Q8N616 119 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF596Q8TC21 504 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 LSM10Q969L4 123 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 RNF126Q9BV68 326 aa14.46□□□□□ -0.09
SHKBP1-224ENST00000600718 LOC105371242A0A075B767 164 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 hCG_1809904A0A1W2PP81 198 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A1W2PPE2 198 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A1W2PR64 198 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A1W2PRV1 198 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 LINC00473A8K010 186 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 NCR3LG1Q68D85 454 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 S1PR3Q99500 378 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 ZFP57Q9NU63 452 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 UBR5O95071 2799 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 SAA2-SAA4A0A096LPE2 208 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 ARPC5O15511 151 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 ATG12O94817 140 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 IGHV2-5P01817 119 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 SAA2P0DJI9 122 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 SLC25A6P12236 298 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 BRWD1-AS2P59051 145 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 PRSS54Q6PEW0 395 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 ADTRPQ96IZ2 230 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF251Q9BRH9 671 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 TMEM133Q9H2Q1 129 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 MBD2Q9UBB5 411 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 PRELID3BQ9Y3B1 194 aa14.45□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A1B0GU03 582 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 C22orf46C9J442 243 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 J3QR06 171 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 RAMP3O60896 148 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 RLN2P04090 185 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 LYL1P12980 280 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 KIR2DS2P43631 304 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 THBS3P49746 956 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 TMUB2Q71RG4 321 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 OR9G1Q8NH87 305 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 RRNAD1Q96FB5 475 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 BPESC1Q9GZL8 116 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 TNFSF18Q9UNG2 199 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 LRBAP50851 2863 aa14.44□□□□□ -0.1
SHKBP1-224ENST00000600718 H0YIZ8 118 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 OR2B11Q5JQS5 317 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 C1orf229Q6ZS94 237 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 ABHD12Q8N2K0 398 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 RNASE11Q8TAA1 199 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 GPR146Q96CH1 333 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 MFFQ9GZY8 342 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 USP9XQ93008 2570 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 NDUFS8O00217 210 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 RBFOX2O43251 390 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 IGKV1-5P01602 117 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 MBPP02686 304 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 PAX1P15863 534 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 ATP5J2P56134 94 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 LINC00205P59089 165 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 S100A10P60903 97 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF816Q0VGE8 651 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 SMCO1Q147U7 214 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 PDZD9Q8IXQ8 264 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 TNFRSF14Q92956 283 aa14.43□□□□□ -0.1
SHKBP1-224ENST00000600718 AKR1C2P52895 323 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 ALKAL2Q6UX46 152 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 FAM219AQ8IW50 185 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 INO80EQ8NBZ0 244 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 DDB2Q92466 427 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 DCUN1D4Q92564 292 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 FAM168AQ92567 244 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 ONECUT1Q9UBC0 465 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 M0R1W7 72 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 FCGR3BO75015 233 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 DEDDO75618 318 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 OR2F2O95006 317 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 SCGB1D2O95969 90 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 HPRT1P00492 218 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 PRRX1P54821 245 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 LMO4P61968 165 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 OR2F1Q13607 317 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF833PQ6ZTB9 187 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 ACOT7LQ6ZUV0 252 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 OR10X1Q8NGY0 326 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 OR1S1Q8NH92 325 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 CLDND2Q8NHS1 167 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 TMEM186Q96B77 213 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 PIMREGQ9BSJ6 248 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 MS4A7Q9GZW8 240 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 PLEKHA2Q9HB19 425 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 OR5AC2Q9NZP5 309 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms