RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 SESN1Q9Y6P5 492 aa9.67□□□□□ -0.86
DDX39A-219ENST00000592927 IGHV3-43A0A0B4J1X8 118 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 CENPVL3A0A0U1RRI6 287 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 HSD17B6O14756 317 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 MMP23AO75900 390 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 FSHBP01225 129 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 IGHV3-43DP0DP04 118 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 IGHV4-38-2P0DP08 117 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 COX7A1P24310 79 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 NFYBP25208 207 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 SRPXP78539 464 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 KLRD1Q13241 179 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 SCGB2A2Q13296 93 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 GNMTQ14749 295 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 LTC4SQ16873 150 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 PHLDA2Q53GA4 152 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 AWAT1Q58HT5 328 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 KLF17Q5JT82 389 aaPredicted RBP9.66□□□□□ -0.86
DDX39A-219ENST00000592927 C8orf31Q8N9H6 132 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 TNFRSF14Q92956 283 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 MGAT4CQ9UBM8 478 aa9.66□□□□□ -0.86
DDX39A-219ENST00000592927 WNK2Q9Y3S1 2297 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 IGHV1-69DA0A0B4J2H0 117 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 C3orf85A0A1B0GTC6 90 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 RNASEK-C17orf49H0YIS7 233 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 UBE2E1P51965 193 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 BPIFB3P59826 476 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 LIN54Q6MZP7 749 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 TBC1D26Q86UD7 250 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 TCTE3Q8IZS6 198 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 PNKDQ8N490 385 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 TCTEX1D1Q8N7M0 179 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 LRTM2Q8N967 370 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 UXS1Q8NBZ7 420 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-219ENST00000592927 OR11H7Q8NGC8 314 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 CASTOR1Q8WTX7 329 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 AGMATQ9BSE5 352 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 ZNF436Q9C0F3 470 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-219ENST00000592927 MS4A7Q9GZW8 240 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-219ENST00000592927 OR2D2Q9H210 308 aa9.65□□□□□ -0.86
DDX39A-219ENST00000592927 VWFP04275 2813 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 A0A087X0M5 115 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 IGHV2-26A0A0B4J1V2 119 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 A0A1B0GX30 115 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 A0A1W2PRD5 423 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 A0A1W2PRF3 423 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 A0A1W2PRM7 423 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 H0Y980 276 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 PGLYRP1O75594 196 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 GIPP09681 153 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 OR5AC1P0C628 307 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 CXCL3P19876 107 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 EPHA1P21709 976 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 F2RP25116 425 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 GPR12P47775 334 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 CD83Q01151 205 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 TMEM187Q14656 261 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 SLC9A3R2Q15599 337 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 RUSC1-AS1Q66K80 236 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 BRD3OSQ6XYD6 125 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF66Q6ZN08 573 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 SLC25A48Q6ZT89 311 aaKnown RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 ABHD12Q8N2K0 398 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 LINC00311Q8N616 119 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 DRAM1Q8N682 238 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 ZNF439Q8NDP4 499 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 PARP12Q9H0J9 701 aaKnown RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 LIN7CQ9NUP9 197 aaKnown RBP9.64□□□□□ -0.87
DDX39A-219ENST00000592927 PIPOXQ9P0Z9 390 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 PSG11Q9UQ72 335 aa9.64□□□□□ -0.87
DDX39A-219ENST00000592927 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 GOSR2O14653 212 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 TOR1AO14656 332 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 NPFFO15130 113 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 OR2A4O95047 310 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 ARG1P05089 322 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 UCP1P25874 307 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 LGALS4P56470 323 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 RAP2BP61225 183 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 CATR1Q13166 79 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 ANKRD55Q3KP44 614 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 LGI3Q8N145 548 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 OR11H6Q8NGC7 330 aa9.63□□□□□ -0.87
DDX39A-219ENST00000592927 OR5M8Q8NGP6 311 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms