RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GPHA2Q96T91 129 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 S1PR3Q99500 378 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 TSNAXQ99598 290 aaKnown RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 ATP5SQ99766 215 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 ABHD14AQ9BUJ0 271 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 PARD6GQ9BYG4 376 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 MAGT1Q9H0U3 335 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 PSENENQ9NZ42 101 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 SLC25A10Q9UBX3 287 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 HSPB7Q9UBY9 170 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 IGHV3-43A0A0B4J1X8 118 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 A0A0G2JRQ6 117 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 IGSF23A1L1A6 192 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 GPR37O15354 613 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 FBXO24O75426 580 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 TFF1P04155 84 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 IGHV3-43DP0DP04 118 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 AGAP20933 346 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 PPOXP50336 477 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 ERVK-16P61578 105 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 RPL30P62888 115 aaKnown RBP8.6□□□□□ -1.03
VPS25-203ENST00000589520 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 HFEQ30201 348 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 AARDQ4LEZ3 155 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 DEFB108BQ8NET1 73 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 OR5C1Q8NGR4 320 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 DCTN5Q9BTE1 182 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 IFI27L2Q9H2X8 130 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
VPS25-203ENST00000589520 TRBV23-1A0A0A0MS06 115 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 BTBD17A6NE02 478 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 FAM90A27PA6NNH2 459 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 C17orf98A8MV24 154 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 DEFB108AA8MXU0 73 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 SOX15O60248 233 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 KRASP01116 189 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 NQO2P16083 231 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 NDUFB7P17568 137 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 OMGP23515 440 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 DYNLT3P51808 116 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 RAB2AP61019 212 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 MRPS11P82912 194 aaKnown RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 ADORA2A-AS1P86434 159 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 HOXA4Q00056 320 aaPredicted RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 ZNF816Q0VGE8 651 aaPredicted RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 ZNF672Q499Z4 452 aaPredicted RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 FAM201AQ5SY85 155 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 DHRS7BQ6IAN0 325 aaPredicted RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 FAM71F2Q6NXP2 309 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 HEPN1Q6WQI6 88 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 MUC15Q8N387 334 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 OR4S2Q8NH73 311 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 LINC01560Q8TB33 94 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 SCGB1C1Q8TD33 95 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 CCL17Q92583 94 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 R3HDM4Q96D70 268 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 C5orf30Q96GV9 206 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 TMEM204Q9BSN7 226 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 HIPK2Q9H2X6 1198 aa8.59□□□□□ -1.03
VPS25-203ENST00000589520 RPUSD1Q9UJJ7 312 aaKnown RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 UBR5O95071 2799 aaPredicted RBP8.59□□□□□ -1.03
VPS25-203ENST00000589520 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 A0A1W2PPH5 198 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 MARCH11A6NNE9 402 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 LINC00473A8K010 186 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 J3QKU1 62 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 M0R1X1 148 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 RAMP3O60896 148 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 FCGR3BO75015 233 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 S1PR2O95136 353 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 TMEM50AO95807 157 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 HRASP01112 189 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 PRH1P02810 166 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 G6PCP35575 357 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 CAMLGP49069 296 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 BRWD1-AS2P59051 145 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 RPL31P62899 125 aaKnown RBP8.58□□□□□ -1.04
VPS25-203ENST00000589520 LTC4SQ16873 150 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
VPS25-203ENST00000589520 CT45A1Q5HYN5 189 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 NCR3LG1Q68D85 454 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 BTNL3Q6UXE8 466 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 TMEM14EPQ6UXP3 125 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 Q6ZRG5 221 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
VPS25-203ENST00000589520 ZGRF1Q86YA3 2104 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 PUSL1Q8N0Z8 303 aaKnown RBP8.58□□□□□ -1.04
VPS25-203ENST00000589520 LINC00311Q8N616 119 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 FAM216BQ8N7L0 139 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 ZNF439Q8NDP4 499 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 OR2G3Q8NGZ4 309 aa8.58□□□□□ -1.04
VPS25-203ENST00000589520 CT45A3Q8NHU0 189 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms