RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 VDAC1P21796 283 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
GGA3-215ENST00000582821 CBX5P45973 191 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 THBS3P49746 956 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 VBP1P61758 197 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 NCS1P62166 190 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 RPS16P62249 146 aaKnown RBP10.95□□□□□ -0.66
GGA3-215ENST00000582821 PSG5Q15238 335 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 CXorf66Q5JRM2 361 aaPredicted RBP10.95□□□□□ -0.66
GGA3-215ENST00000582821 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 BEST4Q8NFU0 473 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 MRPS26Q9BYN8 205 aaKnown RBP10.95□□□□□ -0.66
GGA3-215ENST00000582821 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
GGA3-215ENST00000582821 FCN1O00602 326 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 ATP6V0E1O15342 81 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 GABARAPO95166 117 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 PSMB8P28062 276 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
GGA3-215ENST00000582821 CDX1P47902 265 aaPredicted RBP10.94□□□□□ -0.66
GGA3-215ENST00000582821 ALDH3B2P48448 385 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
GGA3-215ENST00000582821 CX3CL1P78423 397 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 CTF1Q16619 201 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
GGA3-215ENST00000582821 ZNF562Q6V9R5 426 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 ZNF645Q8N7E2 425 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 GVQW1Q8N7I0 195 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 SAMD12Q8N8I0 201 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 MINDY2Q8NBR6 621 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 ACOT12Q8WYK0 555 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 DDB2Q92466 427 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 NUBP2Q9Y5Y2 271 aa10.94□□□□□ -0.66
GGA3-215ENST00000582821 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 IGLV2-23P01705 113 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 CRYGBP07316 175 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 EGR2P11161 476 aaPredicted RBP10.93□□□□□ -0.66
GGA3-215ENST00000582821 NFYAP23511 347 aaPredicted RBP10.93□□□□□ -0.66
GGA3-215ENST00000582821 RORCP51449 518 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 ZNF695Q8IW36 515 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
GGA3-215ENST00000582821 METTL1Q9UBP6 276 aaKnown RBP10.93□□□□□ -0.66
GGA3-215ENST00000582821 TRAV41A0A0B4J266 112 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 IGKV1D-13A0A0B4J2D9 117 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 LINC00473A8K010 186 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 G3V318 75 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 G3V4G9 280 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 WIPF1O43516 503 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 IGLV2-14P01704 120 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 APOA1P02647 267 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 PF4P02776 101 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 RPLP1P05386 114 aaKnown RBP10.92□□□□□ -0.66
GGA3-215ENST00000582821 IGKV1-13P0DP09 117 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 PTHLHP12272 177 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 MYCNOSP40205 109 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 NDPQ00604 133 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 TMEM267Q0VDI3 215 aaPredicted RBP10.92□□□□□ -0.66
GGA3-215ENST00000582821 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
GGA3-215ENST00000582821 PLGLAQ15195 96 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 MSMO1Q15800 293 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 RTL8BQ17RB0 113 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 ETV3LQ6ZN32 361 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 C18orf65Q6ZTR6 163 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 TCTEX1D1Q8N7M0 179 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 BVESQ8NE79 360 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 NAA50Q9GZZ1 169 aaKnown RBP10.92□□□□□ -0.66
GGA3-215ENST00000582821 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 NECAP2Q9NVZ3 263 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
GGA3-215ENST00000582821 WSB1Q9Y6I7 421 aa10.92□□□□□ -0.66
GGA3-215ENST00000582821 SRRM4A7MD48 611 aaKnown RBP10.91□□□□□ -0.66
GGA3-215ENST00000582821 NAT1P18440 290 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 CD33P20138 364 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 TAS2R20P59543 309 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 ARPC4P59998 168 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 CBX3Q13185 183 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 EIF4EBP1Q13541 118 aaPredicted RBP10.91□□□□□ -0.66
GGA3-215ENST00000582821 AKIRIN2Q53H80 203 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 PPP1R27Q86WC6 154 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 LINC00482Q8N8I6 264 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 OR5AP2Q8NGF4 316 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
GGA3-215ENST00000582821 GIMAP1Q8WWP7 306 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 SNAPC3Q92966 411 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 P2RX4Q99571 388 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
GGA3-215ENST00000582821 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
GGA3-215ENST00000582821 J3QRK9 145 aa10.9□□□□□ -0.66
GGA3-215ENST00000582821 SLC25A17O43808 307 aa10.9□□□□□ -0.66
GGA3-215ENST00000582821 DUS4LO95620 317 aaKnown RBP10.9□□□□□ -0.66
GGA3-215ENST00000582821 CA2P00918 260 aa10.9□□□□□ -0.66
GGA3-215ENST00000582821 EIF4EP06730 217 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms