RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 SLC6A1P30531 599 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 CDX1P47902 265 aaPredicted RBP9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 LSM3P62310 102 aaKnown RBP9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 CX3CL1P78423 397 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 SSBP2P81877 361 aaPredicted RBP9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 PDPNQ86YL7 162 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 OR13F1Q8NGS4 319 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 RAX2Q96IS3 184 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 FUNDC2Q9BWH2 189 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 KIAA1456Q9P272 454 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 WSB1Q9Y6I7 421 aa9.67□□□□□ -0.86
SMARCD2-209ENST00000581832 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 SRRM4A7MD48 611 aaKnown RBP9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 LINC00473A8K010 186 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 H7C2Y5 167 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 SOX15O60248 233 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 TUSC2O75896 110 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 HLA-DQB1P01920 261 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 PF4P02776 101 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 PTHLHP12272 177 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 CD33P20138 364 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 VDAC1P21796 283 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 DUTP33316 252 aaKnown RBP9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 MYCNOSP40205 109 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 MRGPRG-AS1Q2M3A8 158 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 ZNF660Q6AZW8 331 aaPredicted RBP9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 CNIH2Q6PI25 160 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 ZNF562Q6V9R5 426 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 CROCCP3Q8IVE0 287 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 ZNF695Q8IW36 515 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 GVQW1Q8N7I0 195 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 GINS4Q9BRT9 223 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 AUNIPQ9H7T9 357 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 TPSG1Q9NRR2 321 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
SMARCD2-209ENST00000581832 TRAV41A0A0B4J266 112 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 IGKV1D-13A0A0B4J2D9 117 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 XRCC3O43542 346 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 SPDEFO95238 335 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 CTXN2P0C2S0 81 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 OR5H8P0DN80 308 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 IGKV1-13P0DP09 117 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 NFYAP23511 347 aaPredicted RBP9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 GNG2P59768 71 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 NCS1P62166 190 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 RPS16P62249 146 aaKnown RBP9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 TMEM177Q53S58 311 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 FOXB2Q5VYV0 432 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 HOGA1Q86XE5 327 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 ZNF491Q8N8L2 437 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 SLC25A46Q96AG3 418 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 FLYWCH2Q96CP2 140 aaKnown RBP9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 VCX3AQ9NNX9 186 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 PARP11Q9NR21 331 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 SLC35D1Q9NTN3 355 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 METTL1Q9UBP6 276 aaKnown RBP9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 OR2W1Q9Y3N9 320 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 SORL1Q92673 2214 aa9.65□□□□□ -0.86
SMARCD2-209ENST00000581832 I3L521 148 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 CCL24O00175 119 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 ARPC1BO15143 372 aaKnown RBP9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 APOA2P02652 100 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 LGALS7P47929 136 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 RAB9AP51151 201 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 TAGLNQ01995 201 aaKnown RBP9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 PJVKQ0ZLH3 352 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 FHL3Q13643 280 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 BVESQ8NE79 360 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 RCC1LQ96I51 464 aaKnown RBP9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
SMARCD2-209ENST00000581832 NUDT19A8MXV4 375 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 SLC25A17O43808 307 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 CA2P00918 260 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 LUMP51884 338 aaPredicted RBP9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 KRTAP10-11P60412 298 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 VBP1P61758 197 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 RPL30P62888 115 aaKnown RBP9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 RUNX1Q01196 453 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 CTF1Q16619 201 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 AKIRIN2Q53H80 203 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 ZNF645Q8N7E2 425 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 BEST4Q8NFU0 473 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 SNAPC3Q92966 411 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 CLCC1Q96S66 551 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 FAM103A1Q9BTL3 118 aaKnown RBP9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 NAA50Q9GZZ1 169 aaKnown RBP9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 DIABLOQ9NR28 239 aa9.63□□□□□ -0.87
SMARCD2-209ENST00000581832 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms