RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NECAP2Q9NVZ3 263 aa7.95□□□□□ -1.14
GGA3-209ENST00000580646 RDH8Q9NYR8 311 aa7.95□□□□□ -1.14
GGA3-209ENST00000580646 OR1A1Q9P1Q5 309 aa7.95□□□□□ -1.14
GGA3-209ENST00000580646 ZNF107Q9UII5 783 aaPredicted RBP7.95□□□□□ -1.14
GGA3-209ENST00000580646 PITPNC1Q9UKF7 332 aa7.95□□□□□ -1.14
GGA3-209ENST00000580646 TRRAPQ9Y4A5 3859 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 A0A1W2PPE3 182 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 A0A1W2PPI3 338 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 F8W036 122 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 H3BUX3 64 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 GABARAPH6UMI1 98 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 I3L521 148 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 TUSC2O75896 110 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 SLC22A5O76082 557 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 IGHV3-7P01780 117 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 C1QBP02746 253 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 ZP3P21754 424 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 TNFSF8P32971 234 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 TAS2R46P59540 309 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 FAM53AQ6NSI3 398 aaPredicted RBP7.94□□□□□ -1.14
GGA3-209ENST00000580646 C16orf82Q7Z2V1 217 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 SNX29P2Q8IUI4 249 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 LYG1Q8N1E2 194 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 DTX3Q8N9I9 347 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.94□□□□□ -1.14
GGA3-209ENST00000580646 ZNF680Q8NEM1 530 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 LINC01006Q8NI28 216 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 WFDC12Q8WWY7 111 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 CFHR4Q92496 578 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 ABHD1Q96SE0 405 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 S1PR3Q99500 378 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 GINS4Q9BRT9 223 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 C11orf54Q9H0W9 315 aaPredicted RBP7.94□□□□□ -1.14
GGA3-209ENST00000580646 RAB18Q9NP72 206 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 MTFP1Q9UDX5 166 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 TCF19Q9Y242 345 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 MRPS7Q9Y2R9 242 aaKnown RBP7.94□□□□□ -1.14
GGA3-209ENST00000580646 RNF114Q9Y508 228 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 HILPDAQ9Y5L2 63 aa7.94□□□□□ -1.14
GGA3-209ENST00000580646 SAA2-SAA4A0A096LPE2 208 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 IGHV1-3A0A0C4DH29 117 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 GSTZ1O43708 216 aaPredicted RBP7.93□□□□□ -1.14
GGA3-209ENST00000580646 RBBP9O75884 186 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 SNAPC5O75971 98 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 SAA2P0DJI9 122 aaPredicted RBP7.93□□□□□ -1.14
GGA3-209ENST00000580646 TBPP20226 339 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 HLA-DMAP28067 261 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 CD1BP29016 333 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 CD83Q01151 205 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 SRSF4Q08170 494 aaKnown RBP7.93□□□□□ -1.14
GGA3-209ENST00000580646 IL18Q14116 193 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 EBI3Q14213 229 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 MSMO1Q15800 293 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 PLA1AQ53H76 456 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 ACTBL2Q562R1 376 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 SPANXN2Q5MJ10 180 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 DHRS7BQ6IAN0 325 aaPredicted RBP7.93□□□□□ -1.14
GGA3-209ENST00000580646 TMEM65Q6PI78 240 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 Q6ZSV7 163 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 OVCH2Q7RTZ1 564 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 CCDC190Q86UF4 302 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 TGIF2LXQ8IUE1 241 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 SMIM4Q8WVI0 70 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 FCAMRQ8WWV6 532 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 DEDD2Q8WXF8 326 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 MARC2Q969Z3 335 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 ZNF251Q9BRH9 671 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 OR2W1Q9Y3N9 320 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 TGP01266 2768 aa7.93□□□□□ -1.14
GGA3-209ENST00000580646 MEIS3P1A6NDR6 274 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 A6NDX4 124 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 FABP12A6NFH5 140 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 KRBOX1C9JBD0 128 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 WRBO00258 174 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 IFNA7P01567 189 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 FAM106CPP0CH98 169 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 OR5H8P0DN80 308 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 PAX6P26367 422 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 PROK1P58294 105 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 DYRK1AQ13627 763 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 DIAPH2-AS1Q14236 149 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 VAX1Q5SQQ9 334 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 DHRS11Q6UWP2 260 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 C12orf57Q99622 126 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 CITED1Q99966 193 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 PARP12Q9H0J9 701 aaKnown RBP7.92□□□□□ -1.14
GGA3-209ENST00000580646 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 TAS2R8Q9NYW2 309 aa7.92□□□□□ -1.14
GGA3-209ENST00000580646 OR5H14A6NHG9 310 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 TIMM23O14925 209 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 TSC22D2O75157 780 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 C4BPBP20851 252 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 GPR12P47775 334 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 LUMP51884 338 aaPredicted RBP7.91□□□□□ -1.14
GGA3-209ENST00000580646 TAS2R19P59542 299 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 LY6EQ16553 131 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 CLLU1Q5K131 121 aa7.91□□□□□ -1.14
GGA3-209ENST00000580646 ZNF660Q6AZW8 331 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms