RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	AVP	P01185	164 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	UCP1	P25874	307 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SAA4	P35542	130 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	BPIFB3	P59826	476 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	RPL30	P62888	115 aa	Known RBP	13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SRPX	P78539	464 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TAGLN	Q01995	201 aa	Known RBP	13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LDLRAD2	Q5SZI1	272 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CCDC144NL	Q6NUI1	221 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OR52B4	Q8NGK2	314 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	MITD1	Q8WV92	249 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TP53RK	Q96S44	253 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	GPHA2	Q96T91	129 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	NABP2	Q9BQ15	211 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SHPK	Q9UHJ6	478 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780		A0A0A6YYJ9	748 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	PIGBOS1	A0A0B4J2F0	54 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780		A0A1W2PPI3	338 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	GAPDH	P04406	335 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CT45A6	P0DMU7	189 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CT45A5	P0DMU8	189 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CT45A7	P0DMV0	189 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	IGHV4-38-2	P0DP08	117 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	EPHA1	P21709	976 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DIAPH2-AS1	Q14236	149 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TMEM187	Q14656	261 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	KLF17	Q5JT82	389 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LHFPL4	Q7Z7J7	247 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ZNF383	Q8NA42	475 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CD300LF	Q8TDQ1	290 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TMEM222	Q9H0R3	208 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	PRELID3B	Q9Y3B1	194 aa		13.53	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	IGHV1-3	A0A0C4DH29	117 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780		A0A1W2PRD5	423 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780		A0A1W2PRF3	423 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780		A0A1W2PRM7	423 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780		H0YJW9	148 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	APOA2	P02652	100 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RPA2	P15927	270 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	REG1B	P48304	166 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RAB13	P51153	203 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	CBX3	Q13185	183 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	HABP2	Q14520	560 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SLC9A3R2	Q15599	337 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RUSC1-AS1	Q66K80	236 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	LIAT1	Q6ZQX7	453 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	PIP4P2	Q8N4L2	257 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	LRTM2	Q8N967	370 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	OR5AN1	Q8NGI8	311 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	OR4S2	Q8NH73	311 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	COQ8A	Q8NI60	647 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	CASTOR1	Q8WTX7	329 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	IL22RA2	Q969J5	263 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	MALSU1	Q96EH3	234 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	PHB2	Q99623	299 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	OR51J1	Q9H342	316 aa		13.52	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RRAS	P10301	218 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	ARHGDIB	P52566	201 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RTL8B	Q17RB0	113 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SP6	Q3SY56	376 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	PDPN	Q86YL7	162 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SPAG16	Q8N0X2	631 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	LGI3	Q8N145	548 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	NANP	Q8TBE9	248 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	GLYATL2	Q8WU03	294 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	AJUBA	Q96IF1	538 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	TMEM56	Q96MV1	263 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	TMEM56-RWDD3	S4R434	201 aa		13.51	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	IGHV3OR16-10	A0A075B7F0	116 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	DUXB	A0A1W2PPF3	345 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SERPINE2	P07093	398 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	FOSL1	P15407	271 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	BRWD1-AS2	P59051	145 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	LINC00205	P59089	165 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	ANKRD55	Q3KP44	614 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	OR2B11	Q5JQS5	317 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	TMUB1	Q9BVT8	246 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SLC35D1	Q9NTN3	355 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	COMMD9	Q9P000	198 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	NUP50	Q9UKX7	468 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	WASHC3	Q9Y3C0	194 aa		13.5	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780		A0A1B0GVG6	124 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	SSNA1	O43805	119 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RAMP3	O60896	148 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	FCGR3B	O75015	233 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	CDS2	O95674	445 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	MC5R	P33032	325 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	ZNF585B	Q52M93	769 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	BRD3OS	Q6XYD6	125 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	C9orf139	Q6ZV77	190 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	LHFPL5	Q8TAF8	219 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	CFHR4	Q92496	578 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	RBPMS	Q93062	196 aa	Known RBP	13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	PLEKHA2	Q9HB19	425 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	TMEM160	Q9NX00	188 aa		13.49	□□□□□ -0.25
CDK5RAP3-215	ENST00000579780	HILPDA	Q9Y5L2	63 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms