RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.3□□□□□ -0.44
CRLF3-203ENST00000578692 LFNGQ8NES3 379 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 FLYWCH2Q96CP2 140 aaKnown RBP12.3□□□□□ -0.44
CRLF3-203ENST00000578692 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
CRLF3-203ENST00000578692 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 M0R1X1 148 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 RAB27BO00194 218 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 OVOL1O14753 267 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 SPDEFO95238 335 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 CA2P00918 260 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 FCGR3AP08637 254 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 OR8U9P0C7N5 309 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 GNB3P16520 340 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 RAB6AP20340 208 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 CD40LGP29965 261 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
CRLF3-203ENST00000578692 ZNF256Q9Y2P7 627 aaPredicted RBP12.3□□□□□ -0.44
CRLF3-203ENST00000578692 A0A075B6Q4 140 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 TRBV6-7A0A0A0MS04 114 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 METTL21EPA6NDL7 271 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 ERICH4A6NGS2 130 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 LINC01619G3V211 115 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 MFNGO00587 321 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 LGALS1P09382 135 aaKnown RBP12.29□□□□□ -0.44
CRLF3-203ENST00000578692 GALP22466 123 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 ZNF429Q86V71 674 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 MAFIPQ8WZ33 124 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
CRLF3-203ENST00000578692 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 CABLES2Q9BTV7 478 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 OR2D2Q9H210 308 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 TPSG1Q9NRR2 321 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 SDHAF2Q9NX18 166 aa12.29□□□□□ -0.44
CRLF3-203ENST00000578692 ZNF230Q9UIE0 474 aaPredicted RBP12.29□□□□□ -0.44
CRLF3-203ENST00000578692 SLC25A17O43808 307 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
CRLF3-203ENST00000578692 DIRAS3O95661 229 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
CRLF3-203ENST00000578692 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
CRLF3-203ENST00000578692 LGALS7P47929 136 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 SLURP1P55000 103 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 FXYD3Q14802 87 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 SLA2Q9H6Q3 261 aa12.28□□□□□ -0.44
CRLF3-203ENST00000578692 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
CRLF3-203ENST00000578692 COL7A1Q02388 2944 aa12.27□□□□□ -0.44
CRLF3-203ENST00000578692 IGHV4OR15-8A0A075B7B6 117 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 A0A087WW49 117 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 A0A0B4J203 849 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.45
CRLF3-203ENST00000578692 LY86O95711 162 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 IGHV3-11P01762 117 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
CRLF3-203ENST00000578692 TALDO1P37837 337 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 TPPP2P59282 170 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
CRLF3-203ENST00000578692 ARPC1AQ92747 370 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 RHOVQ96L33 236 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 CENPOQ9BU64 300 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 ATG5Q9H1Y0 275 aa12.27□□□□□ -0.45
CRLF3-203ENST00000578692 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
CRLF3-203ENST00000578692 SAP30O75446 220 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 CNIH1O95406 144 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 IGLV2-23P01705 113 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 TAGLNQ01995 201 aaKnown RBP12.26□□□□□ -0.45
CRLF3-203ENST00000578692 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 UBE2UQ5VVX9 321 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 NR2C2APQ86WQ0 139 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 SPARTQ8N0X7 666 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 BVESQ8NE79 360 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 GRPEL2Q8TAA5 225 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 GINS4Q9BRT9 223 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
CRLF3-203ENST00000578692 SMIM30A4D0T7 59 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 TRGV3P03979 118 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 CRYGBP07316 175 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
CRLF3-203ENST00000578692 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 CBX3Q13185 183 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 TMEM177Q53S58 311 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 Q6ZS49 121 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 OR5T1Q8NG75 326 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 HARBI1Q96MB7 349 aa12.25□□□□□ -0.45
CRLF3-203ENST00000578692 TXNL4BQ9NX01 149 aaKnown RBP12.25□□□□□ -0.45
CRLF3-203ENST00000578692 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
CRLF3-203ENST00000578692 IGKV1D-8A0A087WSZ0 117 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 NOTOA8MTQ0 251 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 SHOXO15266 292 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 RRASP10301 218 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 PSMB9P28065 219 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 SSBP2P81877 361 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-203ENST00000578692 ACSM6Q6P461 480 aa12.24□□□□□ -0.45
CRLF3-203ENST00000578692 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms