RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	IGKV1-16	P04430	117 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	RRAS	P10301	218 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	PF4V1	P10720	104 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	NFYA	P23511	347 aa	Predicted RBP	19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	SLC6A1	P30531	599 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	PLGLA	Q15195	96 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	MZT2A	Q6P582	158 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	GVQW1	Q8N7I0	195 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	NECAP2	Q9NVZ3	263 aa		19.91	■□□□□ 0.78
SRRM2-223	ENST00000575701	IGHV7-81	A0A0B4J1V7	117 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	SMIM31	A0A1B0GVY4	71 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	RPS16	P62249	146 aa	Known RBP	19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	RTL8B	Q17RB0	113 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	C5orf30	Q96GV9	206 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	FBXL15	Q9H469	300 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	IFT46	Q9NQC8	304 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	VWF	P04275	2813 aa		19.9	■□□□□ 0.78
SRRM2-223	ENST00000575701	TUSC2	O75896	110 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	EIF4E	P06730	217 aa	Known RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	ELANE	P08246	267 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	PTHLH	P12272	177 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	ZNF182	P17025	639 aa	Predicted RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	DUT	P33316	252 aa	Known RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	LGALS7	P47929	136 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	LINC00205	P59089	165 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	RPL23A	P62750	156 aa	Known RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	CFHR3	Q02985	330 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	FOXE3	Q13461	319 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	PSG5	Q15238	335 aa		19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	ZNF660	Q6AZW8	331 aa	Predicted RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	METTL1	Q9UBP6	276 aa	Known RBP	19.89	■□□□□ 0.77
SRRM2-223	ENST00000575701	ATP6V0E1	O15342	81 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	IGHG4	P01861	327 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	CXorf66	Q5JRM2	361 aa	Predicted RBP	19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	RNF152	Q8N8N0	203 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	OR5AP2	Q8NGF4	316 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	BCL7B	Q9BQE9	202 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	PARP11	Q9NR21	331 aa		19.88	■□□□□ 0.77
SRRM2-223	ENST00000575701	PRSS3	P35030	304 aa		19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	TMEM177	Q53S58	311 aa		19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	DDB2	Q92466	427 aa		19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	SNAPC3	Q92966	411 aa		19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	ANAPC10	Q9UM13	185 aa		19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	RBMX2	Q9Y388	322 aa	Known RBP	19.87	■□□□□ 0.77
SRRM2-223	ENST00000575701	PF4	P02776	101 aa		19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	CRIP2	P52943	208 aa	Predicted RBP	19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	MSMO1	Q15800	293 aa		19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	BVES	Q8NE79	360 aa		19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	RAB2B	Q8WUD1	216 aa		19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	HARBI1	Q96MB7	349 aa		19.86	■□□□□ 0.77
SRRM2-223	ENST00000575701	TRAV41	A0A0B4J266	112 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	IGKV1D-13	A0A0B4J2D9	117 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701		J3QRK9	145 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	IGKV1-13	P0DP09	117 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	FCGR2C	P31995	323 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	RPL5	P46777	297 aa	Known RBP	19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	CX3CL1	P78423	397 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	CDK10	Q15131	360 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	CLVS1	Q8IUQ0	354 aa	Predicted RBP	19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	HSD17B10	Q99714	261 aa	Known RBP	19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	SCPEP1	Q9HB40	452 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	PRELID3B	Q9Y3B1	194 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	CMYA5	Q8N3K9	4069 aa		19.85	■□□□□ 0.77
SRRM2-223	ENST00000575701	MEIS3P1	A6NDR6	274 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	LINC00473	A8K010	186 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	SHOX	O15266	292 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	SLC25A17	O43808	307 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	HPGDS	O60760	199 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	NAT1	P18440	290 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	ELK1	P19419	428 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	PPIF	P30405	207 aa	Known RBP	19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	TMBIM6	P55061	237 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	TAS2R46	P59540	309 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	ZNF562	Q6V9R5	426 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	KCTD9	Q7L273	389 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	TCTEX1D1	Q8N7M0	179 aa		19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	OSR1	Q8TAX0	266 aa	Predicted RBP	19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	MRPS7	Q9Y2R9	242 aa	Known RBP	19.84	■□□□□ 0.77
SRRM2-223	ENST00000575701	NUDT19	A8MXV4	375 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	PPY	P01298	95 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	IGLV2-14	P01704	120 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	AADAC	P22760	399 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	PSMB8	P28062	276 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	TMEM267	Q0VDI3	215 aa	Predicted RBP	19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	OVCH2	Q7RTZ1	564 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	PPP1R27	Q86WC6	154 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	GIMAP1	Q8WWP7	306 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	ADAM30	Q9UKF2	790 aa		19.83	■□□□□ 0.77
SRRM2-223	ENST00000575701	FAM25A	B3EWG3	89 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	FAM25C	B3EWG5	89 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	FAM25G	B3EWG6	89 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	FCN1	O00602	326 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	CA2	P00918	260 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	IGLV2-23	P01705	113 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	RPLP1	P05386	114 aa	Known RBP	19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	NDP	Q00604	133 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	ZNF695	Q8IW36	515 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	ZBTB34	Q8NCN2	500 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	KLHL30-AS1	Q8NEE0	82 aa		19.82	■□□□□ 0.76
SRRM2-223	ENST00000575701	GPX8	Q8TED1	209 aa		19.82	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms