RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 FLYWCH2Q96CP2 140 aaKnown RBP16.3■□□□□ 0.2
HCFC1R1-208ENST00000575214 CMTM3Q96MX0 182 aa16.3■□□□□ 0.2
HCFC1R1-208ENST00000575214 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
HCFC1R1-208ENST00000575214 PARP11Q9NR21 331 aa16.3■□□□□ 0.2
HCFC1R1-208ENST00000575214 MEGF8Q7Z7M0 2845 aa16.3■□□□□ 0.2
HCFC1R1-208ENST00000575214 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 HLA-DQB1P01920 261 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 PF4V1P10720 104 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 CBX3Q13185 183 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 CLVS1Q8IUQ0 354 aaPredicted RBP16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 ZNF645Q8N7E2 425 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 SNAPC3Q92966 411 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 OR51J1Q9H342 316 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 NECAP2Q9NVZ3 263 aa16.29■□□□□ 0.2
HCFC1R1-208ENST00000575214 VWFP04275 2813 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 IGHV7-81A0A0B4J1V7 117 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 HPGDSO60760 199 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 IGF1P05019 195 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 ZNF182P17025 639 aaPredicted RBP16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 TAGLNQ01995 201 aaKnown RBP16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 RTL8BQ17RB0 113 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 TEX38Q6PEX7 206 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 ADTRPQ96IZ2 230 aa16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 METTL1Q9UBP6 276 aaKnown RBP16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 MRPS7Q9Y2R9 242 aaKnown RBP16.28■□□□□ 0.2
HCFC1R1-208ENST00000575214 IGKV1D-13A0A0B4J2D9 117 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 FAM25AB3EWG3 89 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 FAM25CB3EWG5 89 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 FAM25GB3EWG6 89 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 ATP6V0E1O15342 81 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 SLC22A5O76082 557 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 SPDEFO95238 335 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 OR5H8P0DN80 308 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 IGKV1-13P0DP09 117 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 DUTP33316 252 aaKnown RBP16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 PRSS3P35030 304 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 PSG5Q15238 335 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 BVESQ8NE79 360 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 CLCC1Q96S66 551 aa16.27■□□□□ 0.2
HCFC1R1-208ENST00000575214 TUSC2O75896 110 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 RRASP10301 218 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 ELK1P19419 428 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 FCGR2CP31995 323 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 RPL5P46777 297 aaKnown RBP16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 RPL23AP62750 156 aaKnown RBP16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 OR5AP2Q8NGF4 316 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 HARBI1Q96MB7 349 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 ZNF580Q9UK33 172 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 RBMX2Q9Y388 322 aaKnown RBP16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 WSB1Q9Y6I7 421 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 LINC00473A8K010 186 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 FCN1O00602 326 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 SHOXO15266 292 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 SLC25A17O43808 307 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 PF4P02776 101 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 AADACP22760 399 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 CX3CL1P78423 397 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 NDPQ00604 133 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 SPCS2Q15005 226 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 CDK10Q15131 360 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 CXorf66Q5JRM2 361 aaPredicted RBP16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 SNX29P2Q8IUI4 249 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 ABHD5Q8WTS1 349 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 RAB2BQ8WUD1 216 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 ZFP57Q9NU63 452 aa16.26■□□□□ 0.19
HCFC1R1-208ENST00000575214 NUDT19A8MXV4 375 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 G3V318 75 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 NOL3O60936 208 aaKnown RBP16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 LGALS7P47929 136 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 CFHR3Q02985 330 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 FOXE3Q13461 319 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 ZNF660Q6AZW8 331 aaPredicted RBP16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 LCNL1Q6ZST4 164 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 KCTD9Q7L273 389 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 SECTM1Q8WVN6 248 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 DDB2Q92466 427 aa16.25■□□□□ 0.19
HCFC1R1-208ENST00000575214 TRAV41A0A0B4J266 112 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 CRYZL1O95825 349 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 CA2P00918 260 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 PPYP01298 95 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 IGHG4P01861 327 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 RPLP1P05386 114 aaKnown RBP16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 ELANEP08246 267 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 TMBIM6P55061 237 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 ECSCRQ19T08 205 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 TMEM177Q53S58 311 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 TPSG1Q9NRR2 321 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 EHFQ9NZC4 300 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 ANAPC10Q9UM13 185 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 PRELID3BQ9Y3B1 194 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 A3GALT2U3KPV4 340 aa16.24■□□□□ 0.19
HCFC1R1-208ENST00000575214 IGLV2-14P01704 120 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 IGLV2-23P01705 113 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 FXYD4P59646 89 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 C18orf65Q6ZTR6 163 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 GPX8Q8TED1 209 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 BCL7BQ9BQE9 202 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 FBXO7Q9Y3I1 522 aa16.23■□□□□ 0.19
HCFC1R1-208ENST00000575214 FCGR3BO75015 233 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms