RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TOLLIPQ9H0E2 274 aa12.06□□□□□ -0.48
RAB40B-203ENST00000570676 SCP2D1Q9UJQ7 156 aa12.06□□□□□ -0.48
RAB40B-203ENST00000570676 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
RAB40B-203ENST00000570676 A0A1W2PPE3 182 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 LEUTXA8MZ59 168 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 BUB1B-PAK6H3BSN5 160 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 PPYP01298 95 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 OPN1MWP04001 364 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 OPN1MW2P0DN77 364 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 OPN1MW3P0DN78 364 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 FXYD4P59646 89 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 Q3ZCU0 254 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 OR2AK2Q8NG84 335 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 EDARADDQ8WWZ3 215 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 SLC2A8Q9NY64 477 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
RAB40B-203ENST00000570676 OR5H14A6NHG9 310 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 TOR1AO14656 332 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 SLC31A2O15432 143 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 OR8U9P0C7N5 309 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 BTCP35070 178 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
RAB40B-203ENST00000570676 CCR6P51684 374 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
RAB40B-203ENST00000570676 CT45A1Q5HYN5 189 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 OR8U1Q8NH10 309 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 TERB2Q8NHR7 220 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 CT45A3Q8NHU0 189 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 MMP28Q9H239 520 aa12.04□□□□□ -0.48
RAB40B-203ENST00000570676 RBM7Q9Y580 266 aaKnown RBP12.04□□□□□ -0.48
RAB40B-203ENST00000570676 PRKDCP78527 4128 aaKnown RBP12.04□□□□□ -0.48
RAB40B-203ENST00000570676 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 J3QR06 171 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 OR2F2O95006 317 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 BRS3P32247 399 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 CEACAM3P40198 252 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 RAB7AP51149 207 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 ZNF134P52741 427 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 PRRX1P54821 245 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 SAMD5Q5TGI4 173 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 AADACL3Q5VUY0 350 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 SLC25A48Q6ZT89 311 aaKnown RBP12.03□□□□□ -0.48
RAB40B-203ENST00000570676 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 C8orf31Q8N9H6 132 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 SECTM1Q8WVN6 248 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 CREB3L1Q96BA8 519 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-203ENST00000570676 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 RNF150Q9ULK6 438 aa12.03□□□□□ -0.48
RAB40B-203ENST00000570676 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 A0A1W2PPI3 338 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 G3V4G9 280 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 AMY1AP04745 511 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 PGAM2P15259 253 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 ARHGDIBP52566 201 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 ARSJQ5FYB0 599 aaPredicted RBP12.02□□□□□ -0.49
RAB40B-203ENST00000570676 LINC00311Q8N616 119 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 OR13C8Q8NGS7 320 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 OR10X1Q8NGY0 326 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 MRGPRFQ96AM1 343 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
RAB40B-203ENST00000570676 SLC5A7Q9GZV3 580 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 OR2D2Q9H210 308 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 IFI27L2Q9H2X8 130 aa12.02□□□□□ -0.49
RAB40B-203ENST00000570676 SH2D7A6NKC9 451 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-203ENST00000570676 SLC6A1P30531 599 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 ECI1P42126 302 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 UCP3P55916 312 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 RBMS2Q15434 407 aaKnown RBP12.01□□□□□ -0.49
RAB40B-203ENST00000570676 KPRPQ5T749 579 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-203ENST00000570676 CCDC144NLQ6NUI1 221 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 NRARPQ7Z6K4 114 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 ABHD14BQ96IU4 210 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 AKR1E2Q96JD6 320 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-203ENST00000570676 AGMATQ9BSE5 352 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 ZNF221Q9UK13 617 aa12.01□□□□□ -0.49
RAB40B-203ENST00000570676 AMMECR1Q9Y4X0 333 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-203ENST00000570676 FAM90A9PA6NNJ1 464 aa12□□□□□ -0.49
RAB40B-203ENST00000570676 HSD17B6O14756 317 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms