RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 OGFRL1Q5TC84 451 aaPredicted RBP11.84□□□□□ -0.51
NME3-211ENST00000568561 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 CEACAM19Q7Z692 300 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 OR9G4Q8NGQ1 327 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 PHYHIPQ92561 330 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 RETNQ9HD89 108 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 C12orf4Q9NQ89 552 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 ZNF221Q9UK13 617 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
NME3-211ENST00000568561 A8MZ25 164 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 IGLV2-23P01705 113 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 KLF5Q13887 457 aaPredicted RBP11.83□□□□□ -0.52
NME3-211ENST00000568561 PDPNQ86YL7 162 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 OR6M1Q8NGM8 313 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 ARHGAP5-AS1Q96IT6 56 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 GFI1Q99684 422 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 RIMS4Q9H426 269 aaPredicted RBP11.83□□□□□ -0.52
NME3-211ENST00000568561 Q9N2K0 584 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 FKBP14Q9NWM8 211 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 RDH8Q9NYR8 311 aa11.83□□□□□ -0.52
NME3-211ENST00000568561 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 FOXI3A8MTJ6 420 aaPredicted RBP11.82□□□□□ -0.52
NME3-211ENST00000568561 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
NME3-211ENST00000568561 CD3GP09693 182 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 SRMP19623 302 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 PACRGLQ8N7B6 248 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 PTX4Q96A99 478 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 THAP7Q9BT49 309 aaPredicted RBP11.82□□□□□ -0.52
NME3-211ENST00000568561 PLGRKTQ9HBL7 147 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 C8orf4Q9NR00 106 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 PLCXD1Q9NUJ7 323 aa11.82□□□□□ -0.52
NME3-211ENST00000568561 A0A0G2JLM5 398 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 H3BUA1 57 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 UCHL1P09936 223 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 VEGFCP49767 419 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 TMEM50BP56557 158 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 CLDN12P56749 244 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 TMEM203Q969S6 136 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 C5orf30Q96GV9 206 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 HARBI1Q96MB7 349 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 CMSS1Q9BQ75 279 aaKnown RBP11.81□□□□□ -0.52
NME3-211ENST00000568561 FAM110AQ9BQ89 295 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 URM1Q9BTM9 101 aaKnown RBP11.81□□□□□ -0.52
NME3-211ENST00000568561 MND1Q9BWT6 205 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 PECRQ9BY49 303 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 OR2D2Q9H210 308 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 COA4Q9NYJ1 87 aa11.81□□□□□ -0.52
NME3-211ENST00000568561 LSM2Q9Y333 95 aaKnown RBP11.81□□□□□ -0.52
NME3-211ENST00000568561 H0Y980 276 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 CDK1P06493 297 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 CRYGBP07316 175 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 CSN3P07498 182 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 CD37P11049 281 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 PLAC9Q5JTB6 97 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 LIPKQ5VXJ0 399 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 BVESQ8NE79 360 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 TINAGL1Q9GZM7 467 aaPredicted RBP11.8□□□□□ -0.52
NME3-211ENST00000568561 PLEKHA3Q9HB20 300 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 PEF1Q9UBV8 284 aaKnown RBP11.8□□□□□ -0.52
NME3-211ENST00000568561 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 MGAT4AQ9UM21 535 aa11.8□□□□□ -0.52
NME3-211ENST00000568561 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
NME3-211ENST00000568561 TRDCB7Z8K6 153 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 SLC17A2O00624 439 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 BET1O15155 118 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 RPS25P62851 125 aaKnown RBP11.79□□□□□ -0.52
NME3-211ENST00000568561 SPHARQ15513 63 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 MED22Q15528 200 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 RAB11BQ15907 218 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 IGSF11Q5DX21 431 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 GTSCR1Q86UQ5 136 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 MAFIPQ8WZ33 124 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 PHB2Q99623 299 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 SDHAF2Q9NX18 166 aa11.79□□□□□ -0.52
NME3-211ENST00000568561 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
NME3-211ENST00000568561 SHOXO15266 292 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 PRH1P02810 166 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 IFNA6P05013 189 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 LGALS7P47929 136 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 LCN12Q6JVE5 192 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 IDO2Q6ZQW0 420 aa11.78□□□□□ -0.52
NME3-211ENST00000568561 MSGN1A6NI15 193 aa11.77□□□□□ -0.53
NME3-211ENST00000568561 FABP7O15540 132 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms