RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZCCHC24Q8N2G6 241 aaKnown RBP15.02□□□□□ -0.01
SMPD3-211ENST00000568373 COMMD1Q8N668 190 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 FAM216BQ8N7L0 139 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 IFI27L2Q9H2X8 130 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.02□□□□□ -0.01
SMPD3-211ENST00000568373 CLN8Q9UBY8 286 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 CARHSP1Q9Y2V2 147 aaKnown RBP15.02□□□□□ -0.01
SMPD3-211ENST00000568373 RFNGQ9Y644 331 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 ITPR1Q14643 2758 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 RAB29O14966 203 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 ZNF134P52741 427 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 SEC11CQ9BY50 192 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 ACACBO00763 2458 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 ITGB1BP1O14713 200 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 METTL15P1P0C7V9 234 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 SNCAP37840 140 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 DVL1P1P54792 670 aaPredicted RBP15.01□□□□□ -0.01
SMPD3-211ENST00000568373 KLRB1Q12918 225 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 TCF23Q7RTU1 214 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 H2BFWTQ7Z2G1 175 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 SVBPQ8N300 66 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 FAM213BQ8TBF2 198 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 RBKSQ9H477 322 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 SAP30LQ9HAJ7 183 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 GFOD1Q9NXC2 390 aa15.01□□□□□ -0.01
SMPD3-211ENST00000568373 PKDREJQ9NTG1 2253 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 KALRNO60229 2985 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 SHISA9B4DS77 424 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 IGHV3-7P01780 117 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 CA7P43166 264 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 RUNX1Q01196 453 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 NCMAPQ5T1S8 102 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 NKX6-2Q9C056 277 aaPredicted RBP15□□□□□ -0.01
SMPD3-211ENST00000568373 EGLN1Q9GZT9 426 aa15□□□□□ -0.01
SMPD3-211ENST00000568373 MARCH11A6NNE9 402 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 M0R1X1 148 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 IFNA5P01569 189 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 RAB7AP51149 207 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 HBG1P69891 147 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 HBG2P69892 147 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 ARL16Q0P5N6 197 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 GUCA2BQ16661 112 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 RPL39P5Q59GN2 51 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 SPANXN5Q5MJ07 72 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 DMRTC2Q8IXT2 367 aaPredicted RBP14.99□□□□□ -0.01
SMPD3-211ENST00000568373 ABHD14AQ9BUJ0 271 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 SLC31A2O15432 143 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 HAPLN4Q86UW8 402 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 ZCCHC14Q8WYQ9 949 aaKnown RBP14.99□□□□□ -0.01
SMPD3-211ENST00000568373 LINC00574Q9H8X3 128 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 GAB2Q9UQC2 676 aa14.99□□□□□ -0.01
SMPD3-211ENST00000568373 TRAV38-1A0A0B4J264 116 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 NKX6-3A6NJ46 265 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 E7EQL1 145 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 TMPRSS2O15393 492 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 FCGR3BO75015 233 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 UTF1Q5T230 341 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 PUSL1Q8N0Z8 303 aaKnown RBP14.98□□□□□ -0.01
SMPD3-211ENST00000568373 ZNF525Q8N782 197 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 CORO2AQ92828 525 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 RNASE6Q93091 150 aaKnown RBP14.98□□□□□ -0.01
SMPD3-211ENST00000568373 LEAP2Q969E1 77 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 R3HDM4Q96D70 268 aa14.98□□□□□ -0.01
SMPD3-211ENST00000568373 ZNF729A6NN14 1252 aaPredicted RBP14.97□□□□□ -0.01
SMPD3-211ENST00000568373 FAM157AC9JC47 383 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 RBFOX2O43251 390 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMPD3-211ENST00000568373 HPRT1P00492 218 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 SFTA3P0C7M3 94 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 CT45A1Q5HYN5 189 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 SLC25A24Q6NUK1 477 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 TMEM14EPQ6UXP3 125 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 C1orf87Q8N0U7 546 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 KDF1Q8NAX2 398 aaPredicted RBP14.97□□□□□ -0.01
SMPD3-211ENST00000568373 ST6GALNAC3Q8NDV1 305 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 CT45A3Q8NHU0 189 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 C9JQL5 133 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 LFNGQ8NES3 379 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 SCRT1Q9BWW7 348 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 IDI2-AS1Q9NZ38 188 aa14.97□□□□□ -0.01
SMPD3-211ENST00000568373 DOCK11Q5JSL3 2073 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 TMEM178BH3BS89 294 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 ZNF273Q14593 569 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 GUK1Q16774 197 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 TMEM30BQ3MIR4 351 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 FBXL19-AS1Q494R0 122 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 AKR1C8PQ5T2L2 129 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 THNSL2Q86YJ6 484 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 LILRB2Q8N423 598 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.96□□□□□ -0.01
SMPD3-211ENST00000568373 NEUROG1Q92886 237 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 PRELID3BQ9Y3B1 194 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 HCFC1P51610 2035 aa14.96□□□□□ -0.01
SMPD3-211ENST00000568373 RBMXL2O75526 392 aaKnown RBP14.96□□□□□ -0.02
SMPD3-211ENST00000568373 NFYBP25208 207 aa14.96□□□□□ -0.02
SMPD3-211ENST00000568373 SCGB1C1Q8TD33 95 aa14.96□□□□□ -0.02
SMPD3-211ENST00000568373 DYNLRB1Q9NP97 96 aa14.96□□□□□ -0.02
SMPD3-211ENST00000568373 PPIAL4EA0A075B759 164 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-211ENST00000568373 hADV38S2A0JD32 116 aa14.95□□□□□ -0.02
SMPD3-211ENST00000568373 FAM90A9PA6NNJ1 464 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms