RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
CCNF-203ENST00000564236 TRBV6-7A0A0A0MS04 114 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 TRAV1-2A0A0B4J238 106 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 TMEM272A0A1B0GTI8 110 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 FABP7O15540 132 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 SAP30O75446 220 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 APOA2P02652 100 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 CD40LGP29965 261 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 LGALS7P47929 136 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 CLDN12P56749 244 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 LINC00205P59089 165 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
CCNF-203ENST00000564236 SRSF7Q16629 238 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCNF-203ENST00000564236 Q6ZS49 121 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 A3GALT2U3KPV4 340 aa12.87□□□□□ -0.35
CCNF-203ENST00000564236 ANKRD65E5RJM6 399 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 C3orf84H3BNL1 204 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 MFNGO00587 321 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 FCGR3AP08637 254 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 SNRPBP14678 240 aaKnown RBP12.86□□□□□ -0.35
CCNF-203ENST00000564236 GP9P14770 177 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 SPNP16150 400 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 TPPP2P59282 170 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
CCNF-203ENST00000564236 PLA2G7Q13093 441 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 FXYD3Q14802 87 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 MOGAT2Q3SYC2 334 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 POC5Q8NA72 575 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 RAB3CQ96E17 227 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 CENPOQ9BU64 300 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 SDHAF2Q9NX18 166 aa12.86□□□□□ -0.35
CCNF-203ENST00000564236 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 M0R1X1 148 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 RAB27BO00194 218 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 SLC25A17O43808 307 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 LY86O95711 162 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 RAB6AP20340 208 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 GALP22466 123 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 SSX1Q16384 188 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 ABHD5Q8WTS1 349 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 CLCC1Q96S66 551 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 ASCL2Q99929 193 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
CCNF-203ENST00000564236 SHISA3A0PJX4 238 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 PDCD5O14737 125 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 TRGV3P03979 118 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 CD3GP09693 182 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
CCNF-203ENST00000564236 MAP2K4P45985 399 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 PITPNAQ00169 270 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 IGSF11Q5DX21 431 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 SBSPONQ8IVN8 264 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 OR10R2Q8NGX6 335 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 OR10J5Q8NHC4 309 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 CCDC90BQ9GZT6 254 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
CCNF-203ENST00000564236 NDUFB11Q9NX14 153 aa12.84□□□□□ -0.35
CCNF-203ENST00000564236 A0A0G2JLM5 398 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 A8MZ25 164 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 IGLV1-51P01701 117 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 GSTT2P0CG29 244 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 GSTT2BP0CG30 244 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 ZP3P21754 424 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 GADD45AP24522 165 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 HSPA13P48723 471 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
CCNF-203ENST00000564236 MRGPRG-AS1Q2M3A8 158 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 HES5Q5TA89 166 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 DDB2Q92466 427 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 OR4C12Q96R67 309 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 STUB1Q9UNE7 303 aa12.83□□□□□ -0.36
CCNF-203ENST00000564236 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
CCNF-203ENST00000564236 FRMD6-AS1P0C7T7 363 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 RRASP10301 218 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 PJVKQ0ZLH3 352 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
CCNF-203ENST00000564236 GRPEL2Q8TAA5 225 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 HARBI1Q96MB7 349 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 ELOVL1Q9BW60 279 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 TINAGL1Q9GZM7 467 aaPredicted RBP12.82□□□□□ -0.36
CCNF-203ENST00000564236 VCX3BQ9H321 246 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 BLOC1S6Q9UL45 172 aa12.82□□□□□ -0.36
CCNF-203ENST00000564236 SORL1Q92673 2214 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 BET1O15155 118 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 MRPS14O60783 128 aaKnown RBP12.81□□□□□ -0.36
CCNF-203ENST00000564236 GNB3P16520 340 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 OR10A3P58181 314 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 ARL6IP1Q15041 203 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms