RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 NT5CQ8TCD5 201 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 OR2M4Q96R27 311 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 NRIP2Q9BQI9 281 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 CBLN4Q9NTU7 201 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 ING1Q9UK53 422 aaPredicted RBP3.86□□□□□ -1.79
SMG1-207ENST00000563235 YTHDF2Q9Y5A9 579 aaKnown RBP3.86□□□□□ -1.79
SMG1-207ENST00000563235 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 IGHMP01871 453 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 LAMP1P11279 417 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 PPICP45877 212 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 SNRPD2P62316 118 aaKnown RBP3.86□□□□□ -1.79
SMG1-207ENST00000563235 CACNG7P62955 275 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 LY6DQ14210 128 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 Q6ZTK2 550 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 PPP1R27Q86WC6 154 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 CDC20BQ86Y33 519 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 OR8B12Q8NGG6 310 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 OR8D4Q8NGM9 314 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 OR2T27Q8NH04 317 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 ACY3Q96HD9 319 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 PRADC1Q9BSG0 188 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 ZNF436Q9C0F3 470 aaPredicted RBP3.86□□□□□ -1.79
SMG1-207ENST00000563235 JPT2Q9H910 190 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 DENND4AQ7Z401 1863 aa3.86□□□□□ -1.79
SMG1-207ENST00000563235 LOXHD1Q8IVV2 1947 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 hCG_1818297A0A087WSY0 165 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 LOC101059948A0A1B0GTJ6 334 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 A0A1B0GXF2 115 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 J3QT63 122 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 SMIM17P0DL12 118 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 HOXB6P17509 224 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 ELK3P41970 407 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 BRWD1-AS2P59051 145 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 MEF2BQ02080 365 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 POU3F1Q03052 451 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 ZNF57Q68EA5 555 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 OOSP2Q86WS3 158 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 GKN2Q86XP6 184 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 CIARTQ8N365 385 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 C5orf17Q8NAS9 161 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PRSS33Q8NF86 280 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 OR10AD1Q8NGE0 317 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 TMEM131Q92545 1883 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 SOSTQ9BQB4 213 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 TMEM147Q9BVK8 224 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 GABARAPL1Q9H0R8 117 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 MMP26Q9NRE1 261 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 TVP23BQ9NYZ1 205 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 FZD1Q9UP38 647 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 TPRKBQ9Y3C4 175 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 COX11Q9Y6N1 276 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 SPTBN5Q9NRC6 3674 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 IFITM5A6NNB3 132 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PHOX2AO14813 284 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PLA2G10O15496 165 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 AIFM1O95831 613 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 OR2H2O95918 312 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 MT-ND4LP03901 98 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 NMBP08949 121 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 RPL22P35268 128 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 HSD52Q0P140 79 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 BCL2L15Q5TBC7 163 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 KRTCAP2Q8N6L1 136 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 FER1L6-AS1Q8NA97 138 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 OR4K5Q8NGD3 323 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 OR5AP2Q8NGF4 316 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 ZNF431Q8TF32 576 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 APOBEC4Q8WW27 367 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 IGFBPL1Q8WX77 278 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 MRPS24Q96EL2 167 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 GPR21Q99679 349 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 ZBP1Q9H171 429 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PLEKHA3Q9HB20 300 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PRTFDC1Q9NRG1 225 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 SLC2A6Q9UGQ3 507 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 MED31Q9Y3C7 131 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 PHF3Q92576 2039 aaKnown RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 COL6A3P12111 3177 aa3.85□□□□□ -1.79
SMG1-207ENST00000563235 FNDC1Q4ZHG4 1894 aaPredicted RBP3.85□□□□□ -1.79
SMG1-207ENST00000563235 H3BP45 60 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 LMX1BO60663 402 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 REM1O75628 298 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 EIF4EP06730 217 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 DRD3P35462 400 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 GPM6AP51674 278 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SEC61BP60468 96 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 EIF3IQ13347 325 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 C1DQ13901 141 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 ECSCRQ19T08 205 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 SLC25A30Q5SVS4 291 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 C10orf91Q5T1B1 145 aa3.84□□□□□ -1.79
SMG1-207ENST00000563235 RPL22L1Q6P5R6 122 aaKnown RBP3.84□□□□□ -1.79
SMG1-207ENST00000563235 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms