RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 Q6ZRM9 215 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 ZBTB34Q8NCN2 500 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 PHYHIPLQ96FC7 376 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 C11orf1Q9H5F2 150 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 TMEM106BQ9NUM4 274 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 NBASA2RRP1 2371 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 B9A039 149 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 SNRNP70P08621 437 aaKnown RBP7.79□□□□□ -1.16
LINC00838-201ENST00000562956 TPT1P13693 172 aaKnown RBP7.79□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF134P52741 427 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 TMEM33P57088 247 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 BRWD1-AS2P59051 145 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 CYB5R2Q6BCY4 276 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
LINC00838-201ENST00000562956 BAP18Q8IXM2 172 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 FAM234AQ9H0X4 552 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 NCOR1P1Q9H4R4 102 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 FBXL17Q9UF56 701 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 JPT1Q9UK76 154 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 C5orf52A6NGY3 159 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 SSSCA1O60232 199 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 FCN3O75636 299 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 S100A8P05109 93 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 LOXP28300 417 aaPredicted RBP7.79□□□□□ -1.16
LINC00838-201ENST00000562956 P2RY1P47900 373 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 ID3Q02535 119 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 Q3ZCU0 254 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 LEAP2Q969E1 77 aa7.79□□□□□ -1.16
LINC00838-201ENST00000562956 PPIAL4EA0A075B759 164 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 TRGV10A0A0A0MS01 117 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 TRAV38-1A0A0B4J264 116 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 LINC00473A8K010 186 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PPIAL4DF5H284 164 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 YPEL1O60688 119 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PROP1O75360 226 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PITX3O75364 302 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 CLDN14O95500 239 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 SFTA3P0C7M3 94 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PPIAL4FP0DN26 164 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 GPX4P36969 197 aaPredicted RBP7.78□□□□□ -1.16
LINC00838-201ENST00000562956 LPAR6P43657 344 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 UQCRFS1P47985 274 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 ZNF672Q499Z4 452 aaPredicted RBP7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PKD1L2Q7Z442 2459 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 RNASE11Q8TAA1 199 aaKnown RBP7.78□□□□□ -1.16
LINC00838-201ENST00000562956 TCTEX1D2Q8WW35 142 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 YPEL2Q96QA6 119 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 CLN8Q9UBY8 286 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 PPIAL4AQ9Y536 164 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 A0A1B0GU03 582 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 A0A1W2PPH5 198 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 C17orf98A8MV24 154 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 TAAR5O14804 337 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 GPR137BO60478 399 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 TMEM50AO95807 157 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 NDUFB7P17568 137 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 DEFA6Q01524 100 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 NHLH2Q02577 135 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 MSMO1Q15800 293 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 C21orf62-AS1Q17RA5 79 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 C1orf87Q8N0U7 546 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 MUC15Q8N387 334 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
LINC00838-201ENST00000562956 CACNG5Q9UF02 275 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 DYSFO75923 2080 aa7.78□□□□□ -1.16
LINC00838-201ENST00000562956 DSCAMO60469 2012 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM8BA6NDV4 472 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 NKX6-3A6NJ46 265 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 KIAA1324LA8MWY0 1029 aaPredicted RBP7.77□□□□□ -1.17
LINC00838-201ENST00000562956 GPR37O15354 613 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 SLC31A2O15432 143 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 YIF1AO95070 293 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 CLDN1O95832 211 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 SLC25A6P12236 298 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF816Q0VGE8 651 aaPredicted RBP7.77□□□□□ -1.17
LINC00838-201ENST00000562956 GPR157Q5UAW9 335 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 LYPD2Q6UXB3 125 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 HIST1H2BAQ96A08 127 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 WFDC1Q9HC57 220 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 SLC25A10Q9UBX3 287 aaPredicted RBP7.77□□□□□ -1.17
LINC00838-201ENST00000562956 COL6A6A6NMZ7 2263 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 PIGBOS1A0A0B4J2F0 54 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 IGHV1-69-2A0A0G2JMI3 117 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 FAM24AA6NFZ4 105 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 C9JQL5 133 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 TNFRSF13BO14836 293 aaPredicted RBP7.77□□□□□ -1.17
LINC00838-201ENST00000562956 GATCO43716 136 aaKnown RBP7.77□□□□□ -1.17
LINC00838-201ENST00000562956 CHST1O43916 411 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 MMP23AO75900 390 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 ARG1P05089 322 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 GPR12P47775 334 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 CAV2P51636 162 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 RPL39P5Q59GN2 51 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 OR2C3Q8N628 320 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms