RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PPP1R27Q86WC6 154 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 BVESQ8NE79 360 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 OR11H1Q8NG94 326 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 FCGR1BQ92637 280 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 PTX4Q96A99 478 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 CENPOQ9BU64 300 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 SDHAF2Q9NX18 166 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 TRBV6-7A0A0A0MS04 114 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 TMEM235A6NFC5 223 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 CA2P00918 260 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 APOA2P02652 100 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 OR5H8P0DN80 308 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 PTHLHP12272 177 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 GALP22466 123 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 FGF9P31371 208 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-208ENST00000558827 RANBP1P43487 201 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 RAB9AP51151 201 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 LSM3P62310 102 aaKnown RBP9.74□□□□□ -0.85
SMAD3-208ENST00000558827 ZNF660Q6AZW8 331 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-208ENST00000558827 SFXN4Q6P4A7 337 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 ZNF491Q8N8L2 437 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 RNF152Q8N8N0 203 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 LFNGQ8NES3 379 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 GRPEL2Q8TAA5 225 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 DPF1Q92782 380 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 CABLES2Q9BTV7 478 aa9.74□□□□□ -0.85
SMAD3-208ENST00000558827 DUS4LO95620 317 aaKnown RBP9.73□□□□□ -0.85
SMAD3-208ENST00000558827 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 APELAP0DMC3 54 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 NFYAP23511 347 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-208ENST00000558827 SERPINB10P48595 397 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 DEFA5Q01523 94 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 C4orf3Q8WVX3 66 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 FLYWCH2Q96CP2 140 aaKnown RBP9.73□□□□□ -0.85
SMAD3-208ENST00000558827 TSNAXQ99598 290 aaKnown RBP9.73□□□□□ -0.85
SMAD3-208ENST00000558827 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 VSIG4Q9Y279 399 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 NUBP2Q9Y5Y2 271 aa9.73□□□□□ -0.85
SMAD3-208ENST00000558827 TRAV18A0A075B6X5 111 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 SEC14L6B5MCN3 397 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 ARPC1BO15143 372 aaKnown RBP9.72□□□□□ -0.85
SMAD3-208ENST00000558827 SSX5O60225 188 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 RBBP9O75884 186 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 CNIH1O95406 144 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 ECI1P42126 302 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 SLURP1P55000 103 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 GNG2P59768 71 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 TAGLNQ01995 201 aaKnown RBP9.72□□□□□ -0.85
SMAD3-208ENST00000558827 FXYD3Q14802 87 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 ACTBL2Q562R1 376 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 OR2B11Q5JQS5 317 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 ASPHD1Q5U4P2 390 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 TPRA1Q86W33 373 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 PDPNQ86YL7 162 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 H1FOOQ8IZA3 346 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-208ENST00000558827 MINDY2Q8NBR6 621 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 PRR25Q96S07 402 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 GPHA2Q96T91 129 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SMAD3-208ENST00000558827 GHITMQ9H3K2 345 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 RHBDL2Q9NX52 303 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 FOXA2Q9Y261 457 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-208ENST00000558827 TNCP24821 2201 aa9.72□□□□□ -0.85
SMAD3-208ENST00000558827 SRRM4A7MD48 611 aaKnown RBP9.71□□□□□ -0.86
SMAD3-208ENST00000558827 LINC00473A8K010 186 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 I3L521 148 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 SHOXO15266 292 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 IGLV2-23P01705 113 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 SLC6A1P30531 599 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 TPPP2P59282 170 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 EGFEM1PQ0D2K5 195 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF260Q3ZCT1 412 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 HACD4Q5VWC8 232 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 DCUN1D4Q92564 292 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 ARPC1AQ92747 370 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 HARBI1Q96MB7 349 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 TOLLIPQ9H0E2 274 aa9.71□□□□□ -0.86
SMAD3-208ENST00000558827 DNAH9Q9NYC9 4486 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 A0A087WW49 117 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 MEIS3P1A6NDR6 274 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 TUSC2O75896 110 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 CRYZL1O95825 349 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 SSBP2P81877 361 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-208ENST00000558827 DGCR2P98153 550 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF616Q08AN1 781 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 TMEM267Q0VDI3 215 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-208ENST00000558827 KCTD21Q4G0X4 260 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 C11orf87Q6NUJ2 197 aa9.7□□□□□ -0.86
SMAD3-208ENST00000558827 ZNF562Q6V9R5 426 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms