RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 DNASE1L1P49184 302 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TSPAN5P62079 268 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 HERVK_113P63121 156 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SLC35A2P78381 396 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM267Q0VDI3 215 aaPredicted RBP-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 RAB31Q13636 194 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 PDK2Q15119 407 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 KISS1Q15726 138 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 MAPK14Q16539 360 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 ARHGAP11BQ3KRB8 267 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CAVIN4Q5BKX8 364 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 LYZL1Q6UWQ5 148 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 C7orf65Q6ZTY9 151 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SLC36A1Q7Z2H8 476 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 ATP5L2Q7Z4Y8 100 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 GPHB5Q86YW7 130 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SBSPONQ8IVN8 264 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 FAM19A2Q8N3H0 131 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 OR8B12Q8NGG6 310 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 OR13C9Q8NGT0 318 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 OR6K2Q8NGY2 324 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SGMS2Q8NHU3 365 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SMCR5Q8TEV8 140 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CASTOR1Q8WTX7 329 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TNFAIP8L1Q8WVP5 186 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 ACY3Q96HD9 319 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 ABHD14BQ96IU4 210 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 OBSCN-AS1Q96MR7 158 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM56Q96MV1 263 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 MBOAT7Q96N66 472 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CATSPER2Q96P56 530 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 IMMP2LQ96T52 175 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 NMNAT3Q96T66 252 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 MGLLQ99685 303 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CIB1Q99828 191 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 APOL4Q9BPW4 351 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 COPS4Q9BT78 406 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 MED18Q9BUE0 208 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 REG4Q9BYZ8 158 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 OR8D2Q9GZM6 311 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 RAB1BQ9H0U4 201 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 MED28Q9H204 178 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CLSTN2Q9H4D0 955 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 LZTFL1Q9NQ48 299 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 CHRAC1Q9NRG0 131 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SLC2A9Q9NRM0 540 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 DMAC2Q9NW81 257 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 VAPAQ9P0L0 249 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 LINC00527Q9UJ94 153 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 HHLA2Q9UM44 414 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 POLR3HQ9Y535 204 aaPredicted RBP-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SOX21Q9Y651 276 aaPredicted RBP-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 LHFPL6Q9Y693 200 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 AQRO60306 1485 aaKnown RBP eCLIP-0.06□□□□□ -2.426e-7■■■□□ 15.2
FOXN3-216ENST00000557496 GRIN2BQ13224 1484 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SCAF11Q99590 1463 aaKnown RBP-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 E9PCH4 1651 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 SMARCA4P51532 1647 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TPRP12270 2363 aaKnown RBP-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM94Q12767 1356 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 TONSLQ96HA7 1378 aa-0.06□□□□□ -2.42
FOXN3-216ENST00000557496 NCOR2Q9Y618 2525 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 PTPRFP10586 1907 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 COL1A1P02452 1464 aaPredicted RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 F8P00451 2351 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 IGHV3-64A0A075B6Q5 118 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 A0A087WUU8 490 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 IGKV1-9A0A0C4DH69 117 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 GSTTP1A0A1W2PQM5 241 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 TMEM235A6NFC5 223 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 C2orf74A8MZ97 194 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 E7EWF7 191 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 SMLR1H3BR10 107 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 BOLA2-SMG1P6H3BVE0 249 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 BHLHE40O14503 412 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 UBFD1O14562 309 aaKnown RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 AZIN1O14977 448 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 FABP7O15540 132 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 NDUFS6O75380 124 aaKnown RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 NSA2O95478 260 aaKnown RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 OTCP00480 354 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 IGKV2D-40P01614 121 aaPredicted RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 PPBPP02775 128 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CLPSP04118 112 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 SHBGP04278 402 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 LGALS1P09382 135 aaKnown RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CD7P09564 240 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CD24P25063 80 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 ALDH3A1P30838 453 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 ARR3P36575 388 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 ACTR1BP42025 376 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 AKR1C3P42330 323 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CBX5P45973 191 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 EVX1P49640 407 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 ETV1P50549 477 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 STC1P52823 247 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CLDN12P56749 244 aa-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 RBM11P57052 281 aaKnown RBP-0.07□□□□□ -2.42
FOXN3-216ENST00000557496 CARD18P57730 90 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms