RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
SNX6-205ENST00000555648 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
SNX6-205ENST00000555648 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
SNX6-205ENST00000555648 SCOCQ9UIL1 159 aa11.98□□□□□ -0.49
SNX6-205ENST00000555648 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
SNX6-205ENST00000555648 NUBP2Q9Y5Y2 271 aa11.98□□□□□ -0.49
SNX6-205ENST00000555648 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 IFITM5A6NNB3 132 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 LDLRAD4O15165 306 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 SLC25A17O43808 307 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 FCGR3AP08637 254 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 LGALS1P09382 135 aaKnown RBP11.97□□□□□ -0.49
SNX6-205ENST00000555648 GNB3P16520 340 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 FXYD3Q14802 87 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 ARL6IP1Q15041 203 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 ALX4Q9H161 411 aaPredicted RBP11.97□□□□□ -0.49
SNX6-205ENST00000555648 OR2D2Q9H210 308 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 SLA2Q9H6Q3 261 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 RAB26Q9ULW5 256 aa11.97□□□□□ -0.49
SNX6-205ENST00000555648 TRDV1A0A1B0GX56 115 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 SOX15O60248 233 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 IGHV3-11P01762 117 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 TRGV3P03979 118 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 GSTT2P0CG29 244 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 GSTT2BP0CG30 244 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 HIST1H1DP16402 221 aaKnown RBP11.96□□□□□ -0.49
SNX6-205ENST00000555648 RAB6AP20340 208 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 LGALS7P47929 136 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 OR10A3P58181 314 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 TAGLNQ01995 201 aaKnown RBP11.96□□□□□ -0.49
SNX6-205ENST00000555648 SSX1Q16384 188 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 IGSF11Q5DX21 431 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 Q9H521 79 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
SNX6-205ENST00000555648 C13orf42A0A1B0GVH6 325 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 SHOXO15266 292 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 MRPS14O60783 128 aaKnown RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 DIRAS3O95661 229 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 HSPB1P04792 205 aaKnown RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 RRASP10301 218 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 SLURP1P55000 103 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 LINC00205P59089 165 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 PITPNAQ00169 270 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 PLA2G7Q13093 441 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 MOGAT2Q3SYC2 334 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 ASPHD1Q5U4P2 390 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 C22orf42Q6IC83 251 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 MAFIPQ8WZ33 124 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 OR4C12Q96R67 309 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 CABLES2Q9BTV7 478 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 ZNF230Q9UIE0 474 aaPredicted RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 KCNK7Q9Y2U2 307 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 LSM4Q9Y4Z0 139 aaKnown RBP11.95□□□□□ -0.5
SNX6-205ENST00000555648 SMAD5-AS1Q9Y6J3 95 aa11.95□□□□□ -0.5
SNX6-205ENST00000555648 IGHV4OR15-8A0A075B7B6 117 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 A0A087WW49 117 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 TRBV6-7A0A0A0MS04 114 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 MFNGO00587 321 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 PROP1O75360 226 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 GALP22466 123 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 PSMB9P28065 219 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 GABARAPL2P60520 117 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 OR6Q1Q8NGQ2 317 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 ADTRPQ96IZ2 230 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 PHB2Q99623 299 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 ELOVL1Q9BW60 279 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 SDHAF2Q9NX18 166 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 U3KQK5 164 aa11.94□□□□□ -0.5
SNX6-205ENST00000555648 A0A0B4J203 849 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 H3BUA1 57 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 RAB27BO00194 218 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 VMA21Q3ZAQ7 101 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 POC5Q8NA72 575 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 BVESQ8NE79 360 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 FCGR1BQ92637 280 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 ASCL2Q99929 193 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 TPSG1Q9NRR2 321 aa11.93□□□□□ -0.5
SNX6-205ENST00000555648 ZP3P21754 424 aa11.92□□□□□ -0.5
SNX6-205ENST00000555648 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX6-205ENST00000555648 RHOVQ96L33 236 aa11.92□□□□□ -0.5
SNX6-205ENST00000555648 ST6GALNAC5Q9BVH7 336 aa11.92□□□□□ -0.5
SNX6-205ENST00000555648 RANGRFQ9HD47 186 aaPredicted RBP11.92□□□□□ -0.5
SNX6-205ENST00000555648 SSR3Q9UNL2 185 aa11.92□□□□□ -0.5
SNX6-205ENST00000555648 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
SNX6-205ENST00000555648 SMIM30A4D0T7 59 aa11.91□□□□□ -0.5
SNX6-205ENST00000555648 NOTOA8MTQ0 251 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms