RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SLC35E4Q6ICL7 350 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 OTOFQ9HC10 1997 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 KLK10O43240 276 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 CLDND2Q8NHS1 167 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 RLFQ13129 1914 aa13.61□□□□□ -0.23
RBFOX1-212ENST00000550418 CD5P06127 495 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 NXPH1P58417 271 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 FXYD3Q14802 87 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 LIFP15018 202 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 OTX1P32242 354 aaPredicted RBP13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 PSMB2P49721 201 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 TNFSF10P50591 281 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 RTP5Q14D33 572 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 WDYHV1Q96HA8 205 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 LCTP09848 1927 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 ARL14EPLP0DKL9 152 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 TCTAP57738 103 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 SPSB4Q96A44 273 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 ZPBPQ9BS86 351 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 OR2J1Q9GZK6 312 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 A0A0J9YW62 118 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 MIEN1Q9BRT3 115 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 AUP1Q9Y679 476 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 PSME4Q14997 1843 aa13.6□□□□□ -0.23
RBFOX1-212ENST00000550418 SMIM12Q96EX1 92 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 LOC101059948A0A1B0GTJ6 334 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 NPIPB7O75200 414 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 ZNF83P51522 516 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 ZNF735P0CB33 412 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 OR1L8Q8NGR8 309 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 ACP1P24666 158 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 RPEQ96AT9 228 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 RAB37Q96AX2 223 aa13.59□□□□□ -0.23
RBFOX1-212ENST00000550418 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.23
RBFOX1-212ENST00000550418 NDUFS6O75380 124 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 ASPHD2Q6ICH7 369 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 C1QL2Q7Z5L3 287 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 UFC1Q9Y3C8 167 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 IGHV1OR15-9A0A0B4J2B8 117 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 NCBP2LA6PVI3 153 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 K7ESF4 209 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 ZG16O60844 167 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 TNXAQ16473 311 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 HARBI1Q96MB7 349 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 HIST1H2BLQ99880 126 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 TDRD6O60522 2096 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 SCN2AQ99250 2005 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 IGHMP01871 453 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 MEOX1P50221 254 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 CRYBB3P26998 211 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 MAS1LP35410 378 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 C14orf144Q96I85 54 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 WNT10AQ9GZT5 417 aa13.58□□□□□ -0.24
RBFOX1-212ENST00000550418 IGFBP3P17936 291 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 KLF3P57682 345 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 GFI1Q99684 422 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 PRRG2O14669 202 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 SNRPCP09234 159 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 STARD6P59095 220 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 ICAM4Q14773 271 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 TRIP6Q15654 476 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 TBL2Q9Y4P3 447 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 OR4C46A6NHA9 309 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 HIST3H2BBQ8N257 126 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 ZNF645Q8N7E2 425 aa13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 PEF1Q9UBV8 284 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-212ENST00000550418 LOC389332A0A1B0GUA5 103 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 ORM1P02763 201 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 NFAM1Q8NET5 270 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 TMEM210A6NLX4 147 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 TMEM170AQ8WVE7 144 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 A0A087WV48 116 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 TMSB15BA0A087X1C1 80 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 EPOPA6NHQ4 379 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 CLDN14O95500 239 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 FOXL2P58012 376 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 LINC00114Q6XXX2 140 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 SLC25A40Q8TBP6 338 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms