RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RITA1Q96K30 269 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 WASHC3Q9Y3C0 194 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 M0R1X1 148 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 RBBP9O75884 186 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 TUSC2O75896 110 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 CD33P20138 364 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 NFYAP23511 347 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 LUMP51884 338 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 ARPC4P59998 168 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 MMDQ15546 238 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 SLC35E3Q7Z769 313 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 DRAXINQ8NBI3 349 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 DYNC2LI1Q8TCX1 351 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
CHMP1A-206ENST00000549139 MEIS3P1A6NDR6 274 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 FAM25AB3EWG3 89 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 FAM25CB3EWG5 89 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 FAM25GB3EWG6 89 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 H7C2Y5 167 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 NBR2O15453 112 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 NOL3O60936 208 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 SLC22A5O76082 557 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 TPPPO94811 219 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 NDUFA3O95167 84 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 NAT1P18440 290 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 LINC00205P59089 165 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 PDPNQ86YL7 162 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 ZNF645Q8N7E2 425 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 CHPT1Q8WUD6 406 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 B9D2Q9BPU9 175 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 IFT46Q9NQC8 304 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 MRPS7Q9Y2R9 242 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 CEPT1Q9Y6K0 416 aa12.38□□□□□ -0.43
CHMP1A-206ENST00000549139 LINC01548A6NM66 108 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 SULT1C2O00338 296 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 APOA2P02652 100 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 CNTFRP26992 372 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 THBS3P49746 956 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 CDK10Q15131 360 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 GIMAP1Q8WWP7 306 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 C5orf30Q96GV9 206 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 ADTRPQ96IZ2 230 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 SCPEP1Q9HB40 452 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 CCDC59Q9P031 241 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 KIAA1456Q9P272 454 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
CHMP1A-206ENST00000549139 IGKV1D-13A0A0B4J2D9 117 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 H3BMQ9 156 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 J3QRK9 145 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 AP4M1O00189 453 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 FCER2P06734 321 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 IGKV1-13P0DP09 117 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 RRASP10301 218 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 FCGR2CP31995 323 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 DUTP33316 252 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 CD83Q01151 205 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 CD69Q07108 199 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 STPG2Q8N412 459 aa12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-206ENST00000549139 PSMB11A5LHX3 300 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 CTDSP2O14595 271 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 RRHO14718 337 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 HLA-DRB1P01911 266 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 OVCH2Q7RTZ1 564 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 SNX29P2Q8IUI4 249 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 LYSMD2Q8IV50 215 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 DDB2Q92466 427 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 NOL4LQ96MY1 436 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 TSNAXQ99598 290 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 HSPB9Q9BQS6 159 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 GON7Q9BXV9 100 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 EXTL2Q9UBQ6 330 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 ZNF107Q9UII5 783 aaPredicted RBP12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 ZNF580Q9UK33 172 aa12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 RBMX2Q9Y388 322 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-206ENST00000549139 RGS5O15539 181 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 SPDEFO95238 335 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 PPYP01298 95 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 IGF1P05019 195 aa12.34□□□□□ -0.43
CHMP1A-206ENST00000549139 AADACP22760 399 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms