RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LINC00473A8K010 186 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 CHRNA7P36544 502 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 TNFRSF9Q07011 255 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF726P1Q15940 193 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNF295-AS1Q8N0V1 137 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 GPR61Q9BZJ8 451 aa11.47□□□□□ -0.57
PRPF40B-209ENST00000548825 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 LY86O95711 162 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 FABP1P07148 127 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 FABP4P15090 132 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 MSMO1Q15800 293 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 RNF212Q495C1 297 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 NRN1LQ496H8 165 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 OR10G4Q8NGN3 311 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 OR10G9Q8NGN4 311 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 OR10G7Q8NGN6 311 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 TAF15Q92804 592 aaKnown RBP eCLIP11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 S100PBPQ96BU1 408 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 PKIBQ9C010 78 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 DOK5Q9P104 306 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 WASF3Q9UPY6 502 aa11.46□□□□□ -0.57
PRPF40B-209ENST00000548825 PGPEP1LA6NFU8 196 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 AP4M1O00189 453 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 PAGE4O60829 102 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 OR8U8P0C7N1 319 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 BCL2P10415 239 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 UTF1Q5T230 341 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 NCR3LG1Q68D85 454 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 COQ2Q96H96 371 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 ATPIF1Q9UII2 106 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 LAMP3Q9UQV4 416 aa11.46□□□□□ -0.58
PRPF40B-209ENST00000548825 LRBAP50851 2863 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 SPINT2O43291 252 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 MYOD1P15172 320 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 KIR2DL2P43627 348 aaPredicted RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 PROCRQ9UNN8 238 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 ACTL6BO94805 426 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 ACSM6Q6P461 480 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 WDR82Q6UXN9 313 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 Q6ZT83 130 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 OR8G5Q8NG78 346 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 FAM210BQ96KR6 192 aa11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 ASH1LQ9NR48 2969 aaKnown RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.45□□□□□ -0.58
PRPF40B-209ENST00000548825 SLC25A6P12236 298 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 PRDX2P32119 198 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 SMIM21Q3B7S5 101 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 Q8IYB0 196 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 OR4A16Q8NH70 328 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 RND1Q92730 232 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 FAM122AQ96E09 287 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 MARCH11A6NNE9 402 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 FRZBQ92765 325 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 SNRNP40Q96DI7 357 aaKnown RBP11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 WDR61Q9GZS3 305 aaKnown RBP11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 PRO1933Q9H354 126 aa11.44□□□□□ -0.58
PRPF40B-209ENST00000548825 RNF212BA8MTL3 300 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 IGHV3-48P01763 117 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 ELOBQ15370 118 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 R3HDM4Q96D70 268 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 MUCL1Q96DR8 90 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 IFT22Q9H7X7 185 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 CCL8P80075 99 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 LYG1Q8N1E2 194 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 SARAFQ96BY9 339 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 ELOVL1Q9BW60 279 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 CXXC4Q9H2H0 198 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 OOEPA6NGQ2 149 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 NDUFB7P17568 137 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 PSMB3P49720 205 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 TOLLIPQ9H0E2 274 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 DCAF16Q9NXF7 216 aa11.43□□□□□ -0.58
PRPF40B-209ENST00000548825 TRAV17A0A0B4J275 112 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 C1QTNF9BB2RNN3 333 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms