RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 RAB40CQ96S21 281 aa4.69□□□□□ -1.66
LIMA1-203ENST00000547825 CYTL1Q9NRR1 136 aa4.69□□□□□ -1.66
LIMA1-203ENST00000547825 CLN8Q9UBY8 286 aa4.69□□□□□ -1.66
LIMA1-203ENST00000547825 ZNF107Q9UII5 783 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-203ENST00000547825 IGKV1D-8A0A087WSZ0 117 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 LRRC3CA6NJW4 275 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 RNF212BA8MTL3 300 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 ZNF814B7Z6K7 855 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 DIRC3C9JPN6 131 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SPINT2O43291 252 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 PIAS2O75928 621 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CTXN2P0C2S0 81 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 OR5G3P0C626 314 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CDC34P49427 236 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SSR4P51571 173 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FUT6P51993 359 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 MRGPRGQ86SM5 289 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 KLHDC1Q8N7A1 406 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SPSB1Q96BD6 273 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 NOL4LQ96MY1 436 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 IMMP2LQ96T52 175 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 RTN4RQ9BZR6 473 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 IGSF23A1L1A6 192 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 LIPT2A6NK58 231 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM157CP0CG43 387 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 IRF2P14316 349 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 RPS4Y1P22090 263 aaKnown RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CD82P27701 267 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 GALNSP34059 522 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 DNM1P46Q6ZS02 220 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 OR10G8Q8NGN5 311 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 APH1AQ96BI3 265 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 OR4C12Q96R67 309 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 BET1LQ9NYM9 111 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A18PA6NE21 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 ZNF503-AS2A6NEH8 195 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A16PA6NEW6 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A9PA6NNJ1 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 TMEM14DPA8MWL7 114 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A5PA8MXJ8 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 TRDCB7Z8K6 153 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 TRAF3IP2O43734 574 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A15PP0C7V4 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 FAM90A14PP0C7W9 464 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 DEFA4P12838 97 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CCKARP32238 428 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 MPLP40238 635 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CLDN15P56746 228 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SPCS3P61009 180 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 MEF2BQ02080 365 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 P2RY6Q15077 328 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 LURAP1LQ8IV03 231 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SLC24A4Q8NFF2 622 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 OR4X1Q8NH49 305 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 SAP25Q8TEE9 199 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CHST5Q9GZS9 411 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 OPN3Q9H1Y3 402 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-203ENST00000547825 WFDC1Q9HC57 220 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 B4GALT7Q9UBV7 327 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 STARD10Q9Y365 291 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 HS3ST3B1Q9Y662 390 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 LHFPL6Q9Y693 200 aa4.68□□□□□ -1.66
LIMA1-203ENST00000547825 CRYM-AS1A6NIL9 109 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 B4DEV8 164 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 MS4A18H0YCH9 400 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 LDLRAD4O15165 306 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 CDS2O95674 445 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 HSPB1P04792 205 aaKnown RBP4.67□□□□□ -1.66
LIMA1-203ENST00000547825 CD5P06127 495 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 AGAP20933 346 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 CBLN1P23435 193 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 CD27P26842 260 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 G6PCP35575 357 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 NXPH1P58417 271 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 SCGB2A2Q13296 93 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 EIF3IQ13347 325 aaKnown RBP4.67□□□□□ -1.66
LIMA1-203ENST00000547825 ELOBQ15370 118 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 MS4A18Q3C1V0 323 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 ALKBH6Q3KRA9 238 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 TRAT1Q6PIZ9 186 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 HEPN1Q6WQI6 88 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 SLC35E3Q7Z769 313 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 ZDHHC23Q8IYP9 409 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 TPRX1Q8N7U7 411 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 LRRC75AQ8NAA5 344 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 PTX4Q96A99 478 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 CTHRC1Q96CG8 243 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 TM4SF19Q96DZ7 209 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 ACY3Q96HD9 319 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 GPX7Q96SL4 187 aaPredicted RBP4.67□□□□□ -1.66
LIMA1-203ENST00000547825 TUBA4BQ9H853 241 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 LIN7CQ9NUP9 197 aaKnown RBP4.67□□□□□ -1.66
LIMA1-203ENST00000547825 FZR1Q9UM11 496 aa4.67□□□□□ -1.66
LIMA1-203ENST00000547825 WASHC3Q9Y3C0 194 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms