RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 BGLAPP02818 100 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 HPNP05981 417 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 NPIPA8P0DM63 369 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 SMIM10L1P0DMW3 83 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ZNF10P21506 573 aaPredicted RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 AADACP22760 399 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 OTX1P32242 354 aaPredicted RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ZNF93P35789 620 aaPredicted RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 FOLR3P41439 243 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 RPL23P62829 140 aaKnown RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 SERF2P84101 59 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 Q0VG73 95 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 MFAP5Q13361 173 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ARFRP1Q13795 201 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 MMDQ15546 238 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 CD226Q15762 336 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 PSG3Q16557 428 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 MSMPQ1L6U9 139 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 PRICKLE4Q2TBC4 344 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 WBP2NLQ6ICG8 309 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 FBXO42Q6P3S6 717 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 VWA1Q6PCB0 445 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ATG4DQ86TL0 474 aaPredicted RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 LINC00346Q8IVM7 164 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 TMEM252Q8N6L7 170 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 OR5AU1Q8NGC0 362 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 PINX1Q96BK5 328 aaKnown RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 MSI2Q96DH6 328 aaKnown RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 SMIM10Q96HG1 83 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 PGAM5Q96HS1 289 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ATP5SQ99766 215 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 SMIM7Q9BQ49 75 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ABHD14AQ9BUJ0 271 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 SF3B5Q9BWJ5 86 aaKnown RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 TM2D1Q9BX74 207 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ZNF703Q9H7S9 590 aaPredicted RBP3.9□□□□□ -1.78
CNGA1-209ENST00000544810 MOB1AQ9H8S9 216 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 ZNF835Q9Y2P0 537 aa3.9□□□□□ -1.78
CNGA1-209ENST00000544810 COL6A5A8TX70 2615 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 SAA2-SAA4A0A096LPE2 208 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 IGHV2-26A0A0B4J1V2 119 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 IGSF23A1L1A6 192 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 PRSS37A4D1T9 235 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 OR5B21A6NL26 309 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 RAD51DO75771 328 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 OR6A2O95222 327 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 HLA-HP01893 362 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 H2BFMP0C1H6 154 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 IL11P20809 199 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 MDKP21741 143 aaPredicted RBP3.9□□□□□ -1.79
CNGA1-209ENST00000544810 GABRA3P34903 492 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 ERVS71-1P61550 626 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 RPL18Q07020 188 aaKnown RBP3.9□□□□□ -1.79
CNGA1-209ENST00000544810 BATFQ16520 125 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 LRRC10Q5BKY1 277 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 PRSS57Q6UWY2 283 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 COX15Q7KZN9 410 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 COMMD2Q86X83 199 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 TCTEX1D1Q8N7M0 179 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 CCDC71LQ8N9Z2 235 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 OR2Y1Q8NGV0 311 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 ZNF519Q8TB69 540 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 MRPL13Q9BYD1 178 aaKnown RBP3.9□□□□□ -1.79
CNGA1-209ENST00000544810 MANBALQ9NQG1 85 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 MRPL22Q9NWU5 206 aaKnown RBP3.9□□□□□ -1.79
CNGA1-209ENST00000544810 GNG13Q9P2W3 67 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 MRPS28Q9Y2Q9 187 aaKnown RBP3.9□□□□□ -1.79
CNGA1-209ENST00000544810 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 TRAPPC1Q9Y5R8 145 aa3.9□□□□□ -1.79
CNGA1-209ENST00000544810 PRRC2CQ9Y520 2896 aaKnown RBP3.89□□□□□ -1.79
CNGA1-209ENST00000544810 ATRQ13535 2644 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 TRAV17A0A0B4J275 112 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 A0A1B0GV50 99 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 AQP7P3A6NL99 342 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 AHRRA9YTQ3 701 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 INAFM1C9JVW0 142 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 IFNL4K9M1U5 179 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 MSTNO14793 375 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 SOCS1O15524 211 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 DHHO43323 396 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 XRCC2O43543 280 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 HYPMO75409 117 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 CD55P08174 381 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 LORP23490 312 aaPredicted RBP3.89□□□□□ -1.79
CNGA1-209ENST00000544810 GNRHRP30968 328 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 NPBWR2P48146 333 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 ZNF133P52736 654 aaPredicted RBP3.89□□□□□ -1.79
CNGA1-209ENST00000544810 RPS15AP62244 130 aaKnown RBP3.89□□□□□ -1.79
CNGA1-209ENST00000544810 LCN6P62502 163 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 MYBPHQ13203 477 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 ADIRFQ15847 76 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 RNF151Q2KHN1 245 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 PLPPR5Q32ZL2 321 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 TMEM108Q6UXF1 575 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 LINC00696Q6ZRV3 163 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 KRTAP1-3Q8IUG1 177 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 OR1L3Q8NH93 324 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
CNGA1-209ENST00000544810 SPSB1Q96BD6 273 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms