RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 NDUFB6O95139 128 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 G6PCP35575 357 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 GNB2P62879 340 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 MYBPHQ13203 477 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 SPRYD7Q5W111 196 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 NEGR1Q7Z3B1 354 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 CLECL1Q8IZS7 167 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 OSR1Q8TAX0 266 aaPredicted RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 SLC25A33Q9BSK2 321 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 HS3ST2Q9Y278 367 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 A0A1W2PP11 408 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 TSPAN11A1L157 253 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 TNFRSF13BO14836 293 aaPredicted RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ATP6V0CP27449 155 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ADGRE4PQ86SQ3 457 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 OR2L13Q8N349 312 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ARHGEF39Q8N4T4 335 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF114Q8NC26 417 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 OR5D14Q8NGL3 314 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 C20orf78Q9BR46 151 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 LIN7CQ9NUP9 197 aaKnown RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 SPEGQ15772 3267 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 FGF10O15520 208 aaPredicted RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 REM1O75628 298 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 CD1AP06126 327 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 SLC25A4P12235 298 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 IFITM1P13164 125 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF20P17024 532 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 TEX43Q6ZNM6 134 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 ZMYND19Q96E35 227 aaPredicted RBP7.57□□□□□ -1.2
VPS13D-212ENST00000543766 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 GABRG3Q99928 467 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 NTNG1Q9Y2I2 539 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 OARD1Q9Y530 152 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 NLRC5Q86WI3 1866 aa7.57□□□□□ -1.2
VPS13D-212ENST00000543766 MYO9BQ13459 2157 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 GABRG2P18507 467 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 PDX1P52945 283 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF658BQ4V348 819 aaPredicted RBP7.56□□□□□ -1.2
VPS13D-212ENST00000543766 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
VPS13D-212ENST00000543766 GNG13Q9P2W3 67 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 SYNGR1O43759 233 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 CXorf1O96002 111 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 DLX6P56179 175 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 PAQR4Q8N4S7 273 aaPredicted RBP7.56□□□□□ -1.2
VPS13D-212ENST00000543766 NUP43Q8NFH3 380 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 PLPPR2Q96GM1 343 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 RTBDNQ9BSG5 229 aaPredicted RBP7.56□□□□□ -1.2
VPS13D-212ENST00000543766 DUSP13Q9UII6 198 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 LOC730098B7Z3J9 87 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 F8VVB4 439 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 F8VWA3 439 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 SNCGO76070 127 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 EML2O95834 649 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF17P17021 662 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 AQP1P29972 269 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 DOK3Q7L591 496 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 OR4K13Q8NH42 304 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 IL36GQ9NZH8 169 aa7.56□□□□□ -1.2
VPS13D-212ENST00000543766 MRPS17Q9Y2R5 130 aaKnown RBP7.56□□□□□ -1.2
VPS13D-212ENST00000543766 NUP210Q8TEM1 1887 aaPredicted RBP7.55□□□□□ -1.2
VPS13D-212ENST00000543766 CASTOR2A6NHX0 329 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 RPL31P62899 125 aaKnown RBP7.55□□□□□ -1.2
VPS13D-212ENST00000543766 KLF17Q5JT82 389 aaPredicted RBP7.55□□□□□ -1.2
VPS13D-212ENST00000543766 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF322Q6U7Q0 402 aaPredicted RBP7.55□□□□□ -1.2
VPS13D-212ENST00000543766 TDHQ8IZJ6 230 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 MYEOVQ96EZ4 313 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 KCNE3Q9Y6H6 103 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 A6NDN8 102 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 SFT2D2O95562 160 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 P01737 135 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 FAM157CP0CG43 387 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 ORM2P19652 201 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 MALP21145 153 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 ZNF506Q5JVG8 444 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 ENTPD8Q5MY95 495 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 CT55Q8WUE5 264 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 OR4C12Q96R67 309 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 ABRACLQ9P1F3 81 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 Q9Y3F1 56 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 A0A1B0GTI1 187 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 A0A1B0GWB2 263 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 K7EP34 96 aa7.55□□□□□ -1.2
VPS13D-212ENST00000543766 DHRS3O75911 302 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms