RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 LINC00482Q8N8I6 264 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 ZNF383Q8NA42 475 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 P2RX4Q99571 388 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 ST6GALNAC5Q9BVH7 336 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 SDHAF2Q9NX18 166 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
UBXN1-217ENST00000534176 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 OR2W1Q9Y3N9 320 aa12.12□□□□□ -0.47
UBXN1-217ENST00000534176 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 TRIM64CA6NLI5 447 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 CCL24O00175 119 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 PROP1O75360 226 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 CX3CL1P78423 397 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 RUNX1Q01196 453 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 MSMO1Q15800 293 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 C8orf86Q6ZUL3 223 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 MRPL41Q8IXM3 137 aaKnown RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 MINDY2Q8NBR6 621 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 BORCS5Q969J3 196 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 YIPF6Q96EC8 236 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 VSIG4Q9Y279 399 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 MRPS7Q9Y2R9 242 aaKnown RBP12.11□□□□□ -0.47
UBXN1-217ENST00000534176 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
UBXN1-217ENST00000534176 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 ARPC1BO15143 372 aaKnown RBP12.1□□□□□ -0.47
UBXN1-217ENST00000534176 HLA-DQB1P01920 261 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 IGKV1-16P04430 117 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 CNTFRP26992 372 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 ARPC4P59998 168 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 PSG5Q15238 335 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 UBE2NLQ5JXB2 153 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 DRAXINQ8NBI3 349 aaPredicted RBP12.1□□□□□ -0.47
UBXN1-217ENST00000534176 RITA1Q96K30 269 aa12.1□□□□□ -0.47
UBXN1-217ENST00000534176 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 TRAV18A0A075B6X5 111 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 H3BUA1 57 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 SHOXO15266 292 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 XRCC3O43542 346 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 IGLL1P15814 213 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 DUTP33316 252 aaKnown RBP12.09□□□□□ -0.47
UBXN1-217ENST00000534176 RAB9AP51151 201 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 ETV3LQ6ZN32 361 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 ABHD5Q8WTS1 349 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 NUDCD2Q8WVJ2 157 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 MAFIPQ8WZ33 124 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 HARBI1Q96MB7 349 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
UBXN1-217ENST00000534176 AIFM2Q9BRQ8 373 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
UBXN1-217ENST00000534176 CLEC2LP0C7M8 214 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 ACTBL2Q562R1 376 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 TEX45Q8NA69 505 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 ACOT12Q8WYK0 555 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 ARPC1AQ92747 370 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 RNF167Q9H6Y7 350 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 AUNIPQ9H7T9 357 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
UBXN1-217ENST00000534176 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 A0A1W2PN81 502 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 SLC25A17O43808 307 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 RAMP3O60896 148 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 CNIH1O95406 144 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 BRI3O95415 125 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 CA2P00918 260 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 CHRNA7P36544 502 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 INSL3P51460 131 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 UBE2KP61086 200 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 EGFEM1PQ0D2K5 195 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 FOXB2Q5VYV0 432 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 ZNF66Q6ZN08 573 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 LCNL1Q6ZST4 164 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
UBXN1-217ENST00000534176 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms