RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SPNP16150 400 aa12.97□□□□□ -0.33
CPSF1-207ENST00000531727 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
CPSF1-207ENST00000531727 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
CPSF1-207ENST00000531727 RHOVQ96L33 236 aa12.97□□□□□ -0.33
CPSF1-207ENST00000531727 RAB22AQ9UL26 194 aa12.97□□□□□ -0.33
CPSF1-207ENST00000531727 TMEM272A0A1B0GTI8 110 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 M0R1X1 148 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
CPSF1-207ENST00000531727 FABP7O15540 132 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 SLC25A17O43808 307 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 CD3GP09693 182 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 MAP2K4P45985 399 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 MRPS15P82914 257 aaKnown RBP12.96□□□□□ -0.33
CPSF1-207ENST00000531727 PITPNAQ00169 270 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 PLA2G7Q13093 441 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 HES5Q5TA89 166 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 OR6Q1Q8NGQ2 317 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 RAB3CQ96E17 227 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
CPSF1-207ENST00000531727 TRGV3P03979 118 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 FCGR3AP08637 254 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 FXYD3Q14802 87 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 IGSF11Q5DX21 431 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 OR2D2Q9H210 308 aa12.95□□□□□ -0.34
CPSF1-207ENST00000531727 RYR3Q15413 4870 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 H3BUA1 57 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 BET1O15155 118 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 DIRAS3O95661 229 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 GP9P14770 177 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 SSBP2P81877 361 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-207ENST00000531727 TBCEQ15813 527 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-207ENST00000531727 MOGAT2Q3SYC2 334 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 SBSPONQ8IVN8 264 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 POC5Q8NA72 575 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 OR10J5Q8NHC4 309 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 SDHAF2Q9NX18 166 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 DNAH7Q8WXX0 4024 aa12.94□□□□□ -0.34
CPSF1-207ENST00000531727 TRBV6-7A0A0A0MS04 114 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 TRAV1-2A0A0B4J238 106 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 MFNGO00587 321 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 PDCD5O14737 125 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 CNIH1O95406 144 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 IGLV2-23P01705 113 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 CRYGBP07316 175 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 GSTT2P0CG29 244 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 GSTT2BP0CG30 244 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 GADD45AP24522 165 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 LGALS7P47929 136 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 OR10A3P58181 314 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 SSX1Q16384 188 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 ZNF367Q7RTV3 350 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 OR5T1Q8NG75 326 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 OR10R2Q8NGX6 335 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 HARBI1Q96MB7 349 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 OR4C12Q96R67 309 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
CPSF1-207ENST00000531727 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
CPSF1-207ENST00000531727 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 SHISA3A0PJX4 238 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 IFITM5A6NNB3 132 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 C3orf84H3BNL1 204 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 GNB3P16520 340 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 RAB6AP20340 208 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 TAGLNQ01995 201 aaKnown RBP12.92□□□□□ -0.34
CPSF1-207ENST00000531727 PJVKQ0ZLH3 352 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 CBX3Q13185 183 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 OVCH2Q7RTZ1 564 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 C5orf30Q96GV9 206 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 ELOVL1Q9BW60 279 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
CPSF1-207ENST00000531727 SORL1Q92673 2214 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 A0A0G2JLM5 398 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 ERICH4A6NGS2 130 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 TRIM64CA6NLI5 447 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 RAB27BO00194 218 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 BRI3O95415 125 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
CPSF1-207ENST00000531727 ZP3P21754 424 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 MYL9P24844 172 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 TMEM177Q53S58 311 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 BVESQ8NE79 360 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 TMEM68Q96MH6 324 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 RANGRFQ9HD47 186 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-207ENST00000531727 NDUFB11Q9NX14 153 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 ZNF230Q9UIE0 474 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-207ENST00000531727 STUB1Q9UNE7 303 aa12.91□□□□□ -0.34
CPSF1-207ENST00000531727 A0A075B6Q4 140 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 SHOXO15266 292 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 IGLV1-51P01701 117 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 RRASP10301 218 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 RAB3BP20337 219 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 HSPA13P48723 471 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
CPSF1-207ENST00000531727 RTL8BQ17RB0 113 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms