RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	HLA-DPB1	P04440	258 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	HMGN2	P05204	90 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	MSMB	P08118	114 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	IFI6	P09912	130 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ACSM4	P0C7M7	580 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	LIMS3	P0CW19	117 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	LIMS4	P0CW20	117 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	AKR1C4	P17516	323 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	PSMB1	P20618	241 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	HIST1H1T	P22492	207 aa	Predicted RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ATP5A1	P25705	553 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	FGF9	P31371	208 aa	Predicted RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TNFSF8	P32971	234 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	SDC2	P34741	201 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	GLP1R	P43220	463 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	KIR2DS4	P43632	304 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	INPP1	P49441	399 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	LIM2	P55344	173 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	WNT4	P56705	351 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	NUTF2	P61970	127 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	PPP3R1	P63098	170 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	CDK5	Q00535	292 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	IFITM3	Q01628	133 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRAM1	Q15629	374 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TBC1D28	Q2M2D7	210 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	CDNF	Q49AH0	187 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	LRRC37A5P	Q49AS3	106 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF626	Q68DY1	528 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF730	Q6ZMV8	503 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	RASSF6	Q6ZTQ3	369 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	CREB3L2	Q70SY1	520 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	FAM19A1	Q7Z5A9	133 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	MRPL52	Q86TS9	123 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ACOT4	Q8N9L9	421 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR10G3	Q8NGC4	313 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR4K5	Q8NGD3	323 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR13D1	Q8NGV5	346 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR6K6	Q8NGW6	343 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR5B3	Q8NH48	314 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR5R1	Q8NH85	324 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	COQ8A	Q8NI60	647 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	SLC7A13	Q8TCU3	470 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ACOT12	Q8WYK0	555 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TMEM203	Q969S6	136 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	MS4A6E	Q96DS6	147 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ADTRP	Q96IZ2	230 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TMEM208	Q9BTX3	173 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TAPBPL	Q9BX59	468 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TSSK6	Q9BXA6	273 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TMEM138	Q9NPI0	162 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	MCUB	Q9NWR8	336 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	NDUFB11	Q9NX14	153 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	MSRB1	Q9NZV6	116 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF107	Q9UII5	783 aa	Predicted RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	KCNIP3	Q9Y2W7	256 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	GOLT1B	Q9Y3E0	138 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	IQCM	A0A1B0GVH7	501 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636		A0A1B0GW55	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRDV1	A0A1B0GX56	115 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	ANKRD20A5P	A0PJZ0	165 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636		A8MVM7	634 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636		B4DXG7	233 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF814	B7Z6K7	855 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	FFAR1	O14842	300 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	CDRT1	O95170	752 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	C1QC	P02747	245 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	APOH	P02749	345 aa	Predicted RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	MT-ND4	P03905	459 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DBI	P07108	87 aa	Known RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	CST2	P09228	141 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	SLC35G6	P0C7Q6	338 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L2	P0CJ85	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L3	P0CJ86	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L4	P0CJ87	422 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L5	P0CJ88	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L6	P0CJ89	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L7	P0CJ90	424 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	PVALB	P20472	110 aa	Predicted RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	GZMH	P20718	246 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	GRPR	P30550	384 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	HOXD3	P31249	432 aa	Predicted RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	RAB25	P57735	213 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	TAS2R31	P59538	309 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	RPL31	P62899	125 aa	Known RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	RPL32	P62910	135 aa	Known RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	BTN3A2	P78410	334 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	OPCML	Q14982	345 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	UBE2V2	Q15819	145 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	ARHGAP11B	Q3KRB8	267 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	HSD17B12	Q53GQ0	312 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	KLF17	Q5JT82	389 aa	Predicted RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	ASPHD1	Q5U4P2	390 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	NXNL2	Q5VZ03	156 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	TYW3	Q6IPR3	259 aa	Known RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	SLC48A1	Q6P1K1	146 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	MBOAT2	Q6ZWT7	520 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	WDSUB1	Q8N9V3	476 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR2T33	Q8NG76	320 aa		4.12	□□□□□ -1.75
PABPC1-223	ENST00000523636	GPR32P1	Q8NGA4	272 aa		4.12	□□□□□ -1.75

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