RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 IFI27L2Q9H2X8 130 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 FAM212BQ9NTI7 297 aaPredicted RBP6.98□□□□□ -1.29
VAPB-206ENST00000520497 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 TMEM56-RWDD3S4R434 201 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 PLXNB1O43157 2135 aa6.98□□□□□ -1.29
VAPB-206ENST00000520497 IGHV2-70DA0A0C4DH43 119 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 FAM157AC9JC47 383 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 M0R1W7 72 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 SLC31A2O15432 143 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ARPC5O15511 151 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 TNFSF12O43508 249 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ENSAO43768 121 aaKnown RBP6.97□□□□□ -1.29
VAPB-206ENST00000520497 TSC22D2O75157 780 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ADAP1O75689 374 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 OR2F2O95006 317 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 VDAC1P21796 283 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 IL3RAP26951 378 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 AKR1C2P52895 323 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 S100A10P60903 97 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRR20EP86478 221 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRR20CP86479 221 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRR20DP86480 221 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRR20BP86481 221 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRR20AP86496 221 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 EIF4EBP1Q13541 118 aaPredicted RBP6.97□□□□□ -1.29
VAPB-206ENST00000520497 OR2F1Q13607 317 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ZNF345Q14585 488 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 SP6Q3SY56 376 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 LRRC37A5PQ49AS3 106 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 CT45A1Q5HYN5 189 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 TMEM65Q6PI78 240 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRSS57Q6UWY2 283 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 DRAM1Q8N682 238 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 Q8N7P7 452 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 C8orf31Q8N9H6 132 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 OR51H1Q8NH63 302 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 CT45A3Q8NHU0 189 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 GLYATL2Q8WU03 294 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 DCUN1D4Q92564 292 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 MSI2Q96DH6 328 aaKnown RBP6.97□□□□□ -1.29
VAPB-206ENST00000520497 C5orf30Q96GV9 206 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 C18orf12Q96KH6 178 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ABHD14AQ9BUJ0 271 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 MFFQ9GZY8 342 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 UNKLQ9H9P5 680 aaKnown RBP6.97□□□□□ -1.29
VAPB-206ENST00000520497 ZC4H2Q9NQZ6 224 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PSG11Q9UQ72 335 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 PRELID3BQ9Y3B1 194 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 SESN1Q9Y6P5 492 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 ACANP16112 2415 aa6.97□□□□□ -1.29
VAPB-206ENST00000520497 KANTRA0A1W2PQU2 76 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 WRBO00258 174 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 RAB29O14966 203 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 ST8SIA5O15466 376 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 PROP1O75360 226 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 FOXH1O75593 365 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 MPC2O95563 127 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 IGHV3-7P01780 117 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 SLC25A6P12236 298 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 NFYBP25208 207 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 S100A11P31949 105 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 LCN2P80188 198 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 Q5PR19 223 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 PRSS54Q6PEW0 395 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 C1orf122Q6ZSJ8 110 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 ZNF767PQ75MW2 155 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 FAM219AQ8IW50 185 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 ODF3L1Q8IXM7 274 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.3
VAPB-206ENST00000520497 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 TCTEX1D2Q8WW35 142 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 LEAP2Q969E1 77 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
VAPB-206ENST00000520497 WDR89Q96FK6 387 aaPredicted RBP6.96□□□□□ -1.3
VAPB-206ENST00000520497 C1orf159Q96HA4 380 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 S1PR3Q99500 378 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 AIFM2Q9BRQ8 373 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 TMEM133Q9H2Q1 129 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 MBD2Q9UBB5 411 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 CACFD1Q9UGQ2 172 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 GAB2Q9UQC2 676 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 KPTNQ9Y664 436 aa6.96□□□□□ -1.3
VAPB-206ENST00000520497 SVEP1Q4LDE5 3571 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 IGHV2-26A0A0B4J1V2 119 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 A0A1B0GU03 582 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 A0A1W2PPE3 182 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 E5RGE8 158 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 IFNA7P01567 189 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 MMP9P14780 707 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 USF1P22415 310 aaPredicted RBP6.95□□□□□ -1.3
VAPB-206ENST00000520497 THBS3P49746 956 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 RIPPLY3P57055 190 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 ERVK-16P61578 105 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 VAMP2P63027 116 aa6.95□□□□□ -1.3
VAPB-206ENST00000520497 EIF5AP63241 154 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms