RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ZZEF1O43149 2961 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 TRBV23-1A0A0A0MS06 115 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 LILRA1O75019 489 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 SOD3P08294 240 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 CECR9P0C854 216 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 ASCL1P50553 236 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 PSG7Q13046 419 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 ZNF718Q3SXZ3 478 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 C9orf152Q5JTZ5 239 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 BEND2Q8NDZ0 799 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 FRZBQ92765 325 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 ANAPC16Q96DE5 110 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 C14orf144Q96I85 54 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 PACRGQ96M98 296 aaPredicted RBP15.4■□□□□ 0.06
SDC2-202ENST00000518385 GPR61Q9BZJ8 451 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 ZNF581Q9P0T4 197 aa15.4■□□□□ 0.06
SDC2-202ENST00000518385 INTS1Q8N201 2190 aaKnown RBP15.39■□□□□ 0.05
SDC2-202ENST00000518385 RNF212BA8MTL3 300 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 KIAA1324LA8MWY0 1029 aaPredicted RBP15.39■□□□□ 0.05
SDC2-202ENST00000518385 SYNGR2O43760 224 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 EPHA1P21709 976 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 CEBPGP53567 150 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 MZT1Q08AG7 82 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 MBNL2Q5VZF2 373 aaKnown RBP15.39■□□□□ 0.05
SDC2-202ENST00000518385 ZNF525Q8N782 197 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 TMEM217Q8N7C4 229 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 ST6GALNAC3Q8NDV1 305 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 ABHD5Q8WTS1 349 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 GPR146Q96CH1 333 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 SSX3Q99909 188 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 C2orf88Q9BSF0 95 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 MANBALQ9NQG1 85 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 CCL28Q9NRJ3 127 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 RPRMQ9NS64 109 aa15.39■□□□□ 0.05
SDC2-202ENST00000518385 LIN7CQ9NUP9 197 aaKnown RBP15.39■□□□□ 0.05
SDC2-202ENST00000518385 AGFG2O95081 481 aa15.38■□□□□ 0.05
SDC2-202ENST00000518385 RUNX1Q01196 453 aa15.38■□□□□ 0.05
SDC2-202ENST00000518385 Q3ZCU0 254 aa15.38■□□□□ 0.05
SDC2-202ENST00000518385 OR10J5Q8NHC4 309 aa15.38■□□□□ 0.05
SDC2-202ENST00000518385 OR5B12Q96R08 314 aa15.38■□□□□ 0.05
SDC2-202ENST00000518385 IGHV2OR16-5A0A0B4J2B6 119 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 IGHV1-18A0A0C4DH31 117 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 LY86O95711 162 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 SCTP09683 121 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 GCH1P30793 250 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 FAM3BP58499 235 aaPredicted RBP15.37■□□□□ 0.05
SDC2-202ENST00000518385 TAS2R60P59551 318 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 ERVK11-1P61568 191 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 HERPUD1Q15011 391 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 MSMO1Q15800 293 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 TMEM241Q24JQ0 296 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 ACOT6Q3I5F7 207 aaPredicted RBP15.37■□□□□ 0.05
SDC2-202ENST00000518385 BRICD5Q6PL45 260 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 SCCPDHQ8NBX0 429 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 URGCP-MRPS24S4R325 110 aa15.37■□□□□ 0.05
SDC2-202ENST00000518385 IGKV1D-13A0A0B4J2D9 117 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 A0A0G2JNJ9 132 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 A0A1B0GWJ7 208 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 SLC31A2O15432 143 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 KBTBD11O94819 623 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 ZNF205O95201 554 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 VENTXO95231 258 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 PGA5P0DJD9 388 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 IGKV1-13P0DP09 117 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 CCKARP32238 428 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 PDLIM4P50479 330 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 WDR25Q64LD2 544 aaPredicted RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 NCR3LG1Q68D85 454 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 ZNF474Q6S9Z5 364 aaPredicted RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 FIP1L1Q6UN15 594 aaKnown RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 SSX8Q7RTT4 187 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 ZBTB34Q8NCN2 500 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 MRPL30Q8TCC3 161 aaKnown RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 HIST1H2BLQ99880 126 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 WDR61Q9GZS3 305 aaKnown RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 CXXC4Q9H2H0 198 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 PSENENQ9NZ42 101 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 Q9UFV3 132 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 MAP1LC3B2A6NCE7 125 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 METTL15P1P0C7V9 234 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 FABP4P15090 132 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 SRP14P37108 136 aaKnown RBP15.36■□□□□ 0.05
SDC2-202ENST00000518385 ERVS71-1P61550 626 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 HNF4GQ14541 408 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 OR10V1Q8NGI7 309 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 NEK7Q8TDX7 302 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 VKORC1Q9BQB6 163 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 MAP1LC3BQ9GZQ8 125 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 OR14J1Q9UGF5 321 aa15.36■□□□□ 0.05
SDC2-202ENST00000518385 A0A087X0M5 115 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 A0A1B0GX30 115 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.35■□□□□ 0.05
SDC2-202ENST00000518385 TYMSP04818 313 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 PFN1P07737 140 aaKnown RBP15.35■□□□□ 0.05
SDC2-202ENST00000518385 MPV17P39210 176 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 PSMB3P49720 205 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 ZNF146Q15072 292 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 PDCD1Q15116 288 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 TCTEX1D1Q8N7M0 179 aa15.35■□□□□ 0.05
SDC2-202ENST00000518385 OR1P1Q8NH06 330 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms