RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NDUFB2O95178 105 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ETHE1O95571 254 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CER1O95813 267 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CA2P00918 260 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 MRPL3P09001 348 aaKnown RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 SMIM13P0DJ93 91 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGLL1P15814 213 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 MDKP21741 143 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CCKBRP32239 447 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 UQCRFS1P47985 274 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMPRSS3P57727 454 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 RAE1P78406 368 aaKnown RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF90Q03938 601 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 DMWDQ09019 674 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PSG5Q15238 335 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 DCAF12Q5T6F0 453 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM78Q5T7P6 136 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ABHD17BQ5VST6 288 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF324BQ6AW86 544 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q6Q795 121 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PARM1Q6UWI2 310 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q6ZPA2 131 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 LHFPL1Q86WI0 220 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q8N976 141 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 FADS6Q8N9I5 356 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR2M3Q8NG83 312 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR52E2Q8NGJ4 325 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10G9Q8NGN4 311 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR1L3Q8NH93 324 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 C8orf46Q8TAG6 207 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PPP1R35Q8TAP8 253 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNRF4Q8WWF5 429 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 RTN4IP1Q8WWV3 396 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 RNF183Q96D59 192 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OXGR1Q96P68 337 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 RCHY1Q96PM5 261 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR2A5Q96R48 311 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ORAI2Q96SN7 254 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 VGLL1Q99990 258 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM103A1Q9BTL3 118 aaKnown RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM133Q9H2Q1 129 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 FNDC4Q9H6D8 234 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CALHM2Q9HA72 323 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PNRC2Q9NPJ4 139 aaKnown RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 KLK13Q9UKR3 277 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 DHDHQ9UQ10 334 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 KLHDC2Q9Y2U9 406 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TIMM9Q9Y5J7 89 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 RFNGQ9Y644 331 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PS18 150 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SMIM9A6NGZ8 99 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRYM-AS1A6NIL9 109 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 LRRC30A6NM36 301 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CPSF4LA6NMK7 179 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ANKRD66B4E2M5 251 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 H3BUT2 72 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 M0QXV9 152 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CCL22O00626 93 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 HOXA3O43365 443 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 HCRTO43612 131 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 NUPR1O60356 82 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 HSBP1O75506 76 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRYGBP07316 175 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGFBP2P18065 325 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPS12P25398 132 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 G6PCP35575 357 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF83P51522 516 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPL27P61353 136 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPS4XP62701 263 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SUPT4H1P63272 117 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 HBG1P69891 147 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 HBG2P69892 147 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SRSF2Q01130 221 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 EIF3IQ13347 325 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ALKBH6Q3KRA9 238 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ABCA11PQ4W5N1 156 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 PRR30Q53SZ7 412 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF684Q5T5D7 378 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 LCN10Q6JVE6 187 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ACSM6Q6P461 480 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 KCTD18Q6PI47 426 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SHISA6Q6ZSJ9 500 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM123Q8N131 208 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CA13Q8N1Q1 262 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM86AQ8N2M4 240 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC22A24Q8N4F4 322 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 GCSAMQ8N6F7 178 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR8B3Q8NGG8 313 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR4F5Q8NH21 305 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10G6Q8NH81 332 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR4A5Q8NH83 315 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 FGF13Q92913 245 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM230Q96A57 120 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 C10orf35Q96D05 121 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR8B2Q96RD0 313 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 NRTNQ99748 197 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 C16orf70Q9BSU1 422 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 TM2D1Q9BX74 207 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms