RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 EMX1Q04741 257 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 UAP1Q16222 522 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 HIST3H3Q16695 136 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 ACSM3Q53FZ2 586 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 RASSF6Q6ZTQ3 369 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR51I2Q9H344 312 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 KLK5Q9Y337 293 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 GRIN2BQ13224 1484 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 GAPVD1Q14C86 1478 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 MAGI1Q96QZ7 1491 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 NAV1Q8NEY1 1877 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 WDR97A6NE52 1622 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 ZSWIM8A7E2V4 1837 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 SYNJ1O43426 1573 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 PTPRJQ12913 1337 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 PBRM1Q86U86 1689 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 LOC102725191A0A1B0GVB3 256 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 KCNK1O00180 336 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 GSTZ1O43708 216 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 REG1AP05451 166 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 CD36P16671 472 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 HOXC5Q00444 222 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 BAMBIQ13145 260 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 SFXN4Q6P4A7 337 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 SBSNQ6UWP8 590 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 ZNF550Q7Z398 422 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 GID4Q8IVV7 300 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 MFSD8Q8NHS3 518 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 FNDC9Q8TBE3 224 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 ASB17Q8WXJ9 295 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR8B2Q96RD0 313 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 XPNPEP1Q9NQW7 623 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 TAS2R9Q9NYW1 312 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 LTBP4Q8N2S1 1624 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 ABCA5Q8WWZ7 1642 aa2.74□□□□□ -1.97
HMGB1P47-201ENST00000511281 ABCA10Q8WWZ4 1543 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 A0A1W2PNM2 257 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 DISC1C4P0D8 188 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 GOLGA6L19H0YKK7 550 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 SLC17A3O00476 420 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 P0C880 135 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 CDKN2CP42773 168 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 CEBPGP53567 150 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 TMEM33P57088 247 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 TAS2R45P59539 299 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 FADDQ13158 208 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR2F1Q13607 317 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 BATFQ16520 125 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 LRRC75BQ2VPJ9 315 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 TMEM176BQ3YBM2 270 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 C1orf194Q5T5A4 169 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 NOXRED1Q6NXP6 359 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 SLC51BQ86UW2 128 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 C1orf174Q8IYL3 243 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 UBL4BQ8N7F7 174 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 HEY1Q9Y5J3 304 aa2.73□□□□□ -1.97
HMGB1P47-201ENST00000511281 GRIN2AQ12879 1464 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR6C6A6NF89 314 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 C17orf98A8MV24 154 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 EVPLLA8MZ36 301 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 APOMO95445 188 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CRYGDP07320 174 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 HOXA6P31267 233 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CCR7P32248 378 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 SLCO1A2P46721 670 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 ADAMTS12P58397 1594 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CTAG1AP78358 180 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 BTN3A2P78410 334 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 NUP160Q12769 1436 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CST6Q15828 149 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 PYDC2Q56P42 97 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 SDK2Q58EX2 2172 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR10K2Q6IF99 312 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CALHM3Q86XJ0 350 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 TMEM109Q9BVC6 243 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR51I1Q9H343 314 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 C16orf95Q9H693 158 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 CHD5Q8TDI0 1954 aa2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 DICER1Q9UPY3 1922 aaKnown RBP2.72□□□□□ -1.97
HMGB1P47-201ENST00000511281 EVC2Q86UK5 1308 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 CEP162Q5TB80 1403 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 IGLV10-54A0A075B6I4 117 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 TMED7-TICAM2A0A0A6YYA0 188 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 IFNA16P05015 189 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 CCL3P10147 92 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 ESDP10768 282 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 UCHL3P15374 230 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 CRYBB3P26998 211 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 MARCKSL1P49006 195 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 RSU1Q15404 277 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR11H1Q8NG94 326 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR10D4PQ8NGN7 298 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 GPR119Q8TDV5 335 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 OR52B2Q96RD2 323 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 LRRC19Q9H756 370 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 MCTS1Q9ULC4 181 aaKnown RBP2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 TOP2BQ02880 1626 aa2.71□□□□□ -1.98
HMGB1P47-201ENST00000511281 GOLGA3Q08378 1498 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms