RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 REG1AP05451 166 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ATP6V0CP27449 155 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 CRABP2P29373 138 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 OPRM1P35372 400 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 TGFBR2P37173 567 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 CA7P43166 264 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 MARCKSL1P49006 195 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 SPCS3P61009 180 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ARF6P62330 175 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 RANP62826 216 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 JOSD1Q15040 202 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LDLRAD2Q5SZI1 272 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 SFXN4Q6P4A7 337 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 HIST2H3AQ71DI3 136 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LYZL2Q7Z4W2 148 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF567Q8N184 647 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRRC25Q8N386 305 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 CLDN22Q8N7P3 220 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR11G2Q8NGC1 345 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 DIRAS2Q96HU8 199 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 PRAP1Q96NZ9 151 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 PECRQ9BY49 303 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 WASHC3Q9Y3C0 194 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 FGD6Q6ZV73 1430 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 LOXHD1Q8IVV2 1947 aa2.31□□□□□ -2.04
TRAPPC13-208ENST00000505553 MLH3Q9UHC1 1453 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 KDM5DQ9BY66 1539 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRP6O75581 1613 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 CLTCQ00610 1675 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 PHLPP1O60346 1717 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGLV2-18A0A075B6J9 118 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 A6NED7 52 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 COLCA2A8K830 154 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 C4orf51C9J302 202 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 H3BQ85 93 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 EEF1E1O43324 174 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 MT-CO2P00403 227 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 PFN1P07737 140 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 CD7P09564 240 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR5G3P0C626 314 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 GDI2P50395 445 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 CTBP2P56545 445 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 BTN3A2P78410 334 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 TSPAN31Q12999 210 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 APOFQ13790 326 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 C5orf46Q6UWT4 87 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF550Q7Z398 422 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 H1FOOQ8IZA3 346 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 HIST1H2BAQ96A08 127 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 TMEM109Q9BVC6 243 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 CYTL1Q9NRR1 136 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 ARL2BPQ9Y2Y0 163 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 MRPS16Q9Y3D3 137 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 PLXNB3Q9ULL4 1909 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 KIF15Q9NS87 1388 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 NACAE9PAV3 2078 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 MED14O60244 1454 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 UGGT1Q9NYU2 1555 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 ITSN2Q9NZM3 1697 aa2.3□□□□□ -2.04
TRAPPC13-208ENST00000505553 CHD2O14647 1828 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 TUBGCP6Q96RT7 1819 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGKV1OR2-108A0A075B7D4 117 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 TGIF2-C20orf24A0A0A6YYL0 155 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 A0A0B4J2C4 111 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGKV1-12A0A0C4DH73 117 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 A8MUU9 505 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 H3BMM0 161 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 GSTZ1O43708 216 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 SH2D1AO60880 128 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGKV1D-12P01611 117 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 IGHV3-53P01767 116 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 OPN1SWP03999 348 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CD79AP11912 226 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CTLA4P16410 223 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR10J1P30954 320 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 PPP1CCP36873 323 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CAPZBP47756 277 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 REG1BP48304 166 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CDK9P50750 372 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 TMEM33P57088 247 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 LINC00313P59037 77 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 DEFA6Q01524 100 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 PDGFRLQ15198 375 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 PLPPR5Q32ZL2 321 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 C10orf91Q5T1B1 145 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 SBSNQ6UWP8 590 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 HMGN2P46Q86SG4 172 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF615Q8N8J6 731 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR5P3Q8WZ94 311 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 SLC35B4Q969S0 331 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 UBE2WQ96B02 151 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CPNE2Q96FN4 548 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 TBX5Q99593 518 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 C1QTNF6Q9BXI9 259 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF835Q9Y2P0 537 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 LINC00588Q9Y4M8 146 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms