RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DAZ1Q9NQZ3 744 aaKnown RBP3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 NKIRAS1Q9NYS0 192 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 POMPQ9Y244 141 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ARID1AO14497 2285 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 IGLV2-18A0A075B6J9 118 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 IGHV3OR16-8A0A075B7F1 116 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 C16orf90A8MZG2 172 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 PSIP1O75475 530 aaKnown RBP3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 IGLV7-43P04211 117 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 CXCL8P10145 99 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 RCVRNP35243 200 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 PMELP40967 661 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM3AP98173 230 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 CACNA1EQ15878 2313 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 HMGN2P46Q86SG4 172 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 SLC13A5Q86YT5 568 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 MUC15Q8N387 334 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR5L1Q8NGL2 311 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 C2orf15Q8WU43 125 aaKnown RBP3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 TIPINQ9BVW5 301 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 INIPQ9NRY2 104 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 DMAC2Q9NW81 257 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 TBL2Q9Y4P3 447 aaKnown RBP3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 ITPR1Q14643 2758 aa3.06□□□□□ -1.92
HMGB1P3-201ENST00000502802 LAMA5O15230 3695 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ANKRD11Q6UB99 2663 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 A0A0A6YYH2 397 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 A6NJ64 397 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 K7EM74 188 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 PIRO00625 290 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 KCNK2O95069 426 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ATP6V1G2O95670 118 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 GTF2F2P13984 249 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF3P17036 446 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 F8A1P23610 371 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 HLA-DMAP28067 261 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ACTR1BP42025 376 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 RPL14P50914 215 aaKnown RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF83P51522 516 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 EMP2P54851 167 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 GTF2BQ00403 316 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 EIF4EBP2Q13542 120 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF235Q14590 738 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM131AQ6UXB0 335 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 CASP12Q6UXS9 341 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 C16orf47Q6ZP98 133 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 DPPA2Q7Z7J5 298 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 MARCH3Q86UD3 253 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZFP62Q8NB50 900 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR4P4Q8NGL7 312 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR8S1Q8NH09 359 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 YIPF5Q969M3 257 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 GPR22Q99680 433 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 PRSS27Q9BQR3 290 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 DRC3Q9H069 523 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 NSRP1Q9H0G5 558 aaKnown RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 NAGKQ9UJ70 344 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 BTRCQ9Y297 605 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 GOLGA4Q13439 2230 aaKnown RBP3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 NUMA1Q14980 2115 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 PTPRBP23467 1997 aa3.05□□□□□ -1.92
HMGB1P3-201ENST00000502802 TMEM250H0YL14 139 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 H3BQV1 296 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 ISLRO14498 428 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 SULT1B1O43704 296 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 EPPINO95925 133 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 CNTFRP26992 372 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 HSPA13P48723 471 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 RWDD2BP57060 319 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 BASP1P80723 227 aaKnown RBP3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 PAFAH1B3Q15102 231 aaKnown RBP3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM151BQ6UXP7 276 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 Q6ZS52 159 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF720Q7Z2F6 126 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 RBP7Q96R05 134 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 RSPO3Q9BXY4 272 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 IGF2RP11717 2491 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 KNTC1P50748 2209 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 CELSR3Q9NYQ7 3312 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZFHX4Q86UP3 3567 aa3.04□□□□□ -1.92
HMGB1P3-201ENST00000502802 SHROOM3Q8TF72 1996 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 MYLKQ15746 1914 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 NYNRINQ9P2P1 1898 aaKnown RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 SVILO95425 2214 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 ATMQ13315 3056 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 IGLL5B9A064 214 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 GOLGA8KD6RF30 607 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 GOLGA8MH3BSY2 632 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 COCHO43405 550 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 ATP8B1O43520 1251 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 HCRTO43612 131 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 HLA-AP01891 365 aaKnown RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 PTHLHP12272 177 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 MLNP12872 115 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 HMGA1P17096 107 aaKnown RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 GDI2P50395 445 aaKnown RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 MED21Q13503 144 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 KPRPQ5T749 579 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM173BQ6P4H8 233 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms