RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 EIF4EBP1Q13541 118 aaPredicted RBP11.55□□□□□ -0.56
USP11-212ENST00000497179 AADACL3Q5VUY0 350 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 GLDNQ6ZMI3 551 aaPredicted RBP11.55□□□□□ -0.56
USP11-212ENST00000497179 ZBTB34Q8NCN2 500 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 S100ZQ8WXG8 99 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 BORCS5Q969J3 196 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 AKR1E2Q96JD6 320 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 CCL28Q9NRJ3 127 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
USP11-212ENST00000497179 DISC1C4P0D8 188 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 APOA2P02652 100 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 UCP3P55916 312 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 LINC00205P59089 165 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 AP3S2P59780 193 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 TAGLNQ01995 201 aaKnown RBP11.54□□□□□ -0.56
USP11-212ENST00000497179 HNF4GQ14541 408 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 BAK1Q16611 211 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 KRTAP21-3Q3LHN1 58 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 FAAP20Q6NZ36 180 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 ZNF818PQ6ZRF7 136 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 DEDD2Q8WXF8 326 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 DDB2Q92466 427 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 HSD17B10Q99714 261 aaKnown RBP11.54□□□□□ -0.56
USP11-212ENST00000497179 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 MOB4Q9Y3A3 225 aa11.54□□□□□ -0.56
USP11-212ENST00000497179 LINC00473A8K010 186 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 FGF16O43320 207 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 NDUFA7O95182 113 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 CRYBA1P05813 215 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 HKR1P10072 659 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 GNRHRP30968 328 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 KCTD9Q7L273 389 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 BVESQ8NE79 360 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 OR8H1Q8NGG4 311 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
USP11-212ENST00000497179 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
USP11-212ENST00000497179 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 SLC2A8Q9NY64 477 aa11.53□□□□□ -0.56
USP11-212ENST00000497179 H7C2Y5 167 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 M0QZK8 103 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 RRASP10301 218 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 FAUP35544 74 aaKnown RBP11.52□□□□□ -0.57
USP11-212ENST00000497179 RPL30P62888 115 aaKnown RBP11.52□□□□□ -0.57
USP11-212ENST00000497179 RELBQ01201 579 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 SLC38A6Q8IZM9 456 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 TERB2Q8NHR7 220 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 MRGPRFQ96AM1 343 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 PRRT1Q99946 306 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 RSRP1Q9BUV0 290 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 HRASLSQ9HDD0 168 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 PLSCR3Q9NRY6 295 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
USP11-212ENST00000497179 TENM1Q9UKZ4 2725 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 GPR31O00270 319 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 TSPAN9O75954 239 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 AMY1AP04745 511 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 IL7P13232 177 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 ECI1P42126 302 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 PPP5CP53041 499 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 RAG2P55895 527 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 CBX3Q13185 183 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 RTL8BQ17RB0 113 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 SCGB2B2Q4G0G5 96 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 ZNF57Q68EA5 555 aaPredicted RBP11.51□□□□□ -0.57
USP11-212ENST00000497179 C11orf88Q6PI97 169 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 Q6ZSV7 163 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 CMTM1Q8IZ96 169 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 C5orf56Q8N8D9 126 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 OR51S1Q8NGJ8 323 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 TCTEX1D2Q8WW35 142 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 TAF15Q92804 592 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP11-212ENST00000497179 RITA1Q96K30 269 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 GPHA2Q96T91 129 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 RNF5Q99942 180 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 CCDC32Q9BV29 185 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 WDR12Q9GZL7 423 aaKnown RBP11.51□□□□□ -0.57
USP11-212ENST00000497179 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
USP11-212ENST00000497179 TMEM89A2RUT3 159 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 NCBP2LA6PVI3 153 aaKnown RBP11.5□□□□□ -0.57
USP11-212ENST00000497179 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 TNFSF12O43508 249 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 PGAM2P15259 253 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 CD40LGP29965 261 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 INPP1P49441 399 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 F2RL1P55085 397 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 CATR1Q13166 79 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 ZNF846Q147U1 533 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 MMDQ15546 238 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 TMEM177Q53S58 311 aa11.5□□□□□ -0.57
USP11-212ENST00000497179 Q8N2B8 174 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms