RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 EXOSC2Q13868 293 aaKnown RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 LTC4SQ16873 150 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 C5orf24Q7Z6I8 188 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 FAM216BQ8N7L0 139 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 OR4D5Q8NGN0 318 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 UBALD1Q8TB05 177 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 H1FXQ92522 213 aaKnown RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 HEXA-AS1Q9H8Q6 139 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 RNF150Q9ULK6 438 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 DOCK11Q5JSL3 2073 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 ABCA1O95477 2261 aa8.48□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-214ENST00000495485 RNF222A6NCQ9 220 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 TNFRSF13BO14836 293 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-214ENST00000495485 RBFOX2O43251 390 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC3-214ENST00000495485 JTBO76095 146 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 HPRT1P00492 218 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-214ENST00000495485 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-214ENST00000495485 NFYBP25208 207 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 THBS3P49746 956 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 ATP5J2P56134 94 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 TMEM33P57088 247 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 LOXL3P58215 753 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 ERVK-16P61578 105 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 TMEM155Q4W5P6 130 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 NMSQ5H8A3 153 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 HEPN1Q6WQI6 88 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 SPAG16Q8N0X2 631 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 OR8B3Q8NGG8 313 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 LHFPL5Q8TAF8 219 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 OR8B2Q96RD0 313 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 RAB40CQ96S21 281 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 COA4Q9NYJ1 87 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 OR5AC2Q9NZP5 309 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 RPUSD1Q9UJJ7 312 aaKnown RBP8.47□□□□□ -1.05
HDAC3-214ENST00000495485 MMP24Q9Y5R2 645 aa8.47□□□□□ -1.05
HDAC3-214ENST00000495485 DSCAML1Q8TD84 2053 aa8.46□□□□□ -1.05
HDAC3-214ENST00000495485 FAM90A9PA6NNJ1 464 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 DVL1O14640 695 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 ATP6V1G1O75348 118 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 RRASP10301 218 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 IL3RAP26951 378 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 TAS2R30P59541 319 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 HOXA4Q00056 320 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-214ENST00000495485 ID3Q02535 119 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 CLLU1Q5K131 121 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 H2BFWTQ7Z2G1 175 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 FGFRL1Q8N441 504 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 STOML3Q8TAV4 291 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 ST8SIA2Q92186 375 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 CLCC1Q96S66 551 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 AGMATQ9BSE5 352 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 DCTN5Q9BTE1 182 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 SLC25A32Q9H2D1 315 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 CHODLQ9H9P2 273 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-214ENST00000495485 RCL1Q9Y2P8 373 aaKnown RBP8.46□□□□□ -1.06
HDAC3-214ENST00000495485 WNK2Q9Y3S1 2297 aa8.46□□□□□ -1.06
HDAC3-214ENST00000495485 H0YIZ8 118 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 M0R1X1 148 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 TOR1AO14656 332 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 SPDEFO95238 335 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 IGHV2-70P01814 119 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 RBP4P02753 201 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
HDAC3-214ENST00000495485 HKR1P10072 659 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 SLC25A16P16260 332 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 EPHA1P21709 976 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 COL8A2P25067 703 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 PRRX1P54821 245 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
HDAC3-214ENST00000495485 BAXQ07812 192 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 FAM71F2Q6NXP2 309 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 CLEC2AQ6UVW9 174 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 BAP18Q8IXM2 172 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 PDZD9Q8IXQ8 264 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 C8orf31Q8N9H6 132 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 OR4S2Q8NH73 311 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 NRGNQ92686 78 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 GPR146Q96CH1 333 aa8.45□□□□□ -1.06
HDAC3-214ENST00000495485 NEIL1Q96FI4 390 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-214ENST00000495485 CIB3Q96Q77 187 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-214ENST00000495485 TEP1Q99973 2627 aaKnown RBP8.45□□□□□ -1.06
HDAC3-214ENST00000495485 HIVEP2P31629 2446 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 NSD1Q96L73 2696 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 PPIHO43447 177 aaKnown RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 HRASP01112 189 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 SELLP14151 372 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 FOSL1P15407 271 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 OMGP23515 440 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 DUTP33316 252 aaKnown RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 CDKN1AP38936 164 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 PDLIM4P50479 330 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms